Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452177
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Entry
135452177 CDS
T09958
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135452177 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zle04990
]
135452177 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
zle04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
135452177 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_spondin
TSP1_CCN
PLAC
Motif
Other DBs
NCBI-GeneID:
135452177
NCBI-ProteinID:
XP_064578107
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All DBs
Position
10:5979002..6221144
Genome browser
AA seq
1010 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLGFQLVIPQPSIEHRKVPQRIEEHGDAPEDSGGVPGLWGSWGP
WSACSRSCSGGVMEQTRPCLPAYYRERGYRRPGRHFPAPERGAHREDSLSAYPGHVISAI
RTSVPLHRSEEQPWAPPRNSSSSGGQGGRAALRGSRHSQGPRHSARPDSRSRNRNPIGPG
KYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRSHLFQQSPGLLSPYSQAAAPSLQHGSLY
QEPGGPQAGHQVLGPSVYQSPSFPVSQSLFHGGDSSPQALQGQPQPQRAAAIVCIGAYKQ
YKLCNTNMCPESSRNIREVQCASYNNKPFMGRFYEWEPFAEVKGSQKCELNCRAIGYRFY
VRQAETVIDGTPCEPNGTAICVAGQCKSIGCDDYLGSDKVIDKCGICGGDNTACKVVSGV
FKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYLALRSRSGRSIINGNWAIDRPGRYEG
GGTMFTYRRPNEISSTAGESFLADGPTNEVLDVYMIHQQPNPGIHYEYIIPGDNVISPQL
LAHRRPGEPLNGQLGMPEGTSHESEDLHRETDILTGQSAGTFPVIQPGRFPSHQPENQVP
AMQPPRQNREYNWKQVGKTECTTTCGKGSQYPIFHCVNRITHEEVPEGYCDSSTKPIPEE
EACNLFPCPAFWDIGEWSECSKTCGLGMQHRQILCRQIYANRTLTVQQYRCQHLEKPDTT
STCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGDVVDDEECNMKLRPNDIENC
DMGPCAKSWFLTEWSDRCSAECGDGIRTRSVLCMTNHVSSLPLEGCGNNRPAETTPCNNG
PCAGRVEWFAGGWTQCSTECGSGTQQREVICVRKTEGNFEVLSPYECSYLEKPPSQQSCY
LKPCGSKWFHTEWSTCSKSCEGGFRLREVRCLSDDMAASSQCDPQLKPEEKEPCNTQDCV
PEIDENCKDKYYNCNVVVQARLCVYTYYKSACCASCSRVANRQPGFLGRR
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagacttctcagttccctagcagtgctgggattt
cagcttgtcatcccacagccttcaattgaacacagaaaggtgccgcagaggatagaggag
cacggcgatgcccccgaggacagcggcggagtgccgggcctgtggggcagctgggggccc
tggtccgcctgctcgcggagctgcagcggcggcgtcatggagcagacacggccctgcctg
cccgcctattaccgggagcgcggctaccgccgcccgggccgccacttcccggcccccgag
cgcggcgcccaccgcgaggactcgctgtccgcctaccccgggcacgtcatctctgccatc
cgcacctccgtgccgctgcaccgcagcgaggagcagccgtgggcaccgccgcggaacagc
agcagcagcggcggccagggcgggcgggcggcgctgaggggcagccggcactcgcagggc
ccgcggcacagcgccaggcccgacagcagaagcagaaaccgaaatcccattggtccaggg
aagtatggctatgggaaggtgccgtacattttacctttacaaactgacactgggcagcag
ccccagaagctgcggcggcagcgccaatcgtccaggagccacctgttccagcagagcccg
ggcctcctgagcccctacagccaggctgctgctccctccctgcagcatggcagcctctac
caggagccaggggggcctcaggcgggacaccaagtcctggggccctcggtctatcagtcc
ccttcgttccctgtgtctcagagcctgttccacggcggtgactccagccctcaggccctg
cagggccagccccagccccagagggctgcagccatcgtctgcattggtgcctacaagcaa
tacaaactctgcaacacaaatatgtgtcctgaaagcagcaggaatattagagaggtacag
tgtgcatcatacaataacaagccatttatgggtcgattttatgaatgggaaccttttgca
gaagtgaagggcagccagaagtgtgagctgaactgccgcgccatcggctaccgcttctac
gtgcgccaggcggagaccgtgatcgacggcaccccctgcgagcccaacggcacggccatc
tgcgtggcggggcagtgcaagagcattggctgtgacgactatctgggttctgacaaggtg
attgacaagtgtggaatatgtggaggggacaacactgcttgcaaagttgtgtctggagtt
ttcaaacacacgctaacaaatcttggctaccacaagatagtggaaattcctgaaggagct
actaaaatcaacattactgagatgtcaaagagcaacaactacttggccctgcgcagccgc
tcgggacgctccatcatcaacggcaactgggccatcgaccggccgggcaggtacgaagga
gggggcacaatgttcacctacagacgccccaatgagatctccagcactgcaggggagtcc
tttctggctgatgggccaaccaatgaagtccttgatgtctatatgattcatcagcagcct
aaccctggtatacattatgaatatatcattccaggagacaatgtcattagtcctcagttg
cttgctcacaggaggccaggggagccactgaatggtcagttaggaatgccagaaggtaca
agtcatgagtctgaggatttgcatagagagacagacattctcactggacagtcagctgga
actttcccagttattcagccaggaagatttccttctcatcagccagaaaaccaggtgcct
gctatgcaaccaccaagacaaaaccgagaatacaactggaaacaggttgggaaaactgag
tgcaccactacatgtgggaaaggatcacagtacccaattttccactgcgtgaacagaatc
actcacgaggaggtacccgagggttactgtgacagcagcaccaaacccattccagaagag
gaggcctgcaacctcttcccatgccctgctttctgggacataggggagtggtctgagtgc
agcaagacgtgcgggctggggatgcagcaccggcagatcctgtgccggcagatctacgcc
aaccgcacgctgaccgtgcagcagtaccgctgccagcacctggagaagcccgacaccacc
agcacctgccagctcaagatctgcagcgagtggcagatcaggactgagtggacctcatgt
tcagtgccttgtggagtggggcagaggactcgagatgtgaagtgtgtcagcaaccttggg
gacgttgttgatgatgaggaatgtaacatgaagctgcggccaaatgacatcgagaactgc
gacatgggcccctgtgccaagagctggttccttacagaatggagtgacaggtgctcggca
gagtgcggggacgggatccgcacacgctccgtgctctgcatgaccaaccacgtcagcagc
ctgcccctggagggctgcggcaacaacagacccgcggaaacaacgccctgcaacaacggg
ccctgcgctggcagggtcgagtggtttgctgggggctggacacagtgttctactgaatgt
ggtagtggaactcagcagagagaagtaatttgtgttaggaaaactgaaggtaattttgaa
gttttgagcccctatgaatgttcatatttggaaaaacctcccagccagcagtcctgctac
ctcaaaccatgtggatctaagtggtttcatacagaatggagcacatgttccaagtcctgc
gaaggcggctttcggctgcgcgaggtgcgctgcctgtcggacgacatggccgccagctcc
cagtgtgacccacagctcaaacctgaggagaaggagccctgtaacacacaggattgtgtc
cctgaaatagatgagaactgcaaggataaatactacaactgcaacgtggtggttcaggcg
cggctctgtgtgtacacctactacaagtcagcgtgctgtgcctcgtgcagccgcgtggca
aacagacagccgggcttcctgggccgcagataa
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