Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452390
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Entry
135452390 CDS
T09958
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135452390 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135452390 (NEIL1)
Enzymes [BR:
zle01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
135452390 (NEIL1)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
135452390 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
135452390
NCBI-ProteinID:
XP_064578463
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All DBs
Position
10:3685104..3688956
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AA seq
428 aa
AA seq
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MGALPAPRAANGGGPCHGGGSGGGLGPCRAAATMPECPELHLAGRFINGACGALVFAGGV
ERSAVGRGPEVPFRSEAYGISATARGKELRLTLSALDPAAGPPAQDLVFRFGMSGSFRLC
PAAELPRHAHLRFLTRESPPRALCFVDPRRFGSWRLGDAWQPERGPCVVSEYQAFRENVL
KNLEDRAFDKPICEVLLNQKYFNGIGNYLRAEILYRLKIPPFEKARTVLEALKEQEQERR
KKDPSLTLSKKVKLRQENPDLLELCHSVPMEVIMAEKQLLDPEHPDNYSNFKNWLQCYLV
PGMSSLRDRSGRTIWFQGEPGPMAPKGQRPRKAPRRKSPELKAEPEAPSPKVTPRAPKQR
RRAAAKPPKQEEKEVKEEQEEQAGRPRKGRARGRRTASAAPASPEVPQSVRRSRRASARR
GTGAAPAV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgctccccgcgccccgcgcagccaatgggggcgggccgtgccacggcggtggc
agtggcggtggactcgggccgtgccgtgcggccgccaccatgcccgagtgcccggagctg
cacctggccgggcgcttcatcaacggggcctgcggggcgctggtgttcgcgggcggcgtg
gagcgctcggccgtggggcgcggccccgaggtgcccttccgcagcgaggcctacggcatc
tcggccacagcccggggcaaggagctgcggctgacgctgagcgcgctggaccccgccgcc
ggtccccccgcgcaggacctggtgttccgcttcggcatgtcgggctcgttccggctgtgc
cccgccgccgagctgccccgccatgcccacctgcgcttcctgacccgggagagccctccc
cgcgccctctgcttcgtggacccgcggcgcttcgggtcctggcgcctgggggacgcctgg
cagccggagcgcgggccctgcgtggtgtccgagtaccaggcgttcagggagaatgtgctg
aagaacctggaggacagggcttttgacaagcccatctgtgaggtgctcttaaaccagaag
tatttcaatggaattgggaattacctgcgtgctgagatcctgtacaggttgaagatccct
ccctttgaaaaagctcggaccgtgctggaggccctgaaggagcaggagcaagagaggagg
aagaaggatccttccctgacgctgagcaagaaggtgaagctgaggcaggagaacccagat
ctgctggagctgtgccacagcgtgcccatggaggtgatcatggcagagaagcagctcctg
gaccccgagcacccggataattactccaactttaagaactggctgcagtgttacttggtg
cccggcatgagctccctgcgggaccgcagtggcaggaccatatggttccagggagagcct
ggccccatggctcccaaagggcagagaccccgcaaggcgccccgcaggaagagcccagag
ctgaaggcagagcccgaggcaccgagccccaaggtcaccccccgtgccccgaagcagcgc
cgcagggctgcagcgaaacccccaaagcaggaggagaaggaagtgaaggaagagcaggag
gagcaggctggcaggccaaggaagggacgtgcccgtgggaggaggacagcgagtgctgcc
ccagcctcgcctgaggtgcctcagagtgtcaggagaagccgccgcgcatccgctcgcagg
ggcacaggtgcagcccctgccgtgtga
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