Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452404
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Entry
135452404 CDS
T09958
Symbol
DET1
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135452404 (DET1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135452404 (DET1)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
135452404 (DET1)
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
135452404
NCBI-ProteinID:
XP_064578484
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Position
10:12901389..12914629
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AA seq
551 aa
AA seq
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MDHEAPTIRPRRIQNQNVIHRLERRRISSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPC
FLRKFSPDGRYFIAFSSDQTSLEIYEYQGCQAAEDLLQGYEGEILANGNDQRSVNIRGRL
FERFFVLLHITNVASNGEHLNRECSLFTDDCRYVIVGSAAYLPEEPHPPFFEVYRNSESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRAFKCDKVILSHNQGLYLYKNILAILSVQQQTIH
VFQVTPEGTFIDVRTIGRFCYEDDLLTLSAVYPEVQRDTQTGMANPYKEPFINSLKHRLL
VYLWRRAEQDGSAIAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHSEAVQFPCSASSNNFAR
QIQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSGSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFEIQAGLLGRPINHTVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHSCT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaccatgaggcgcccaccatcaggccccggcgcatccagaaccagaatgtcatccac
cgcctggagcggcgccgcatcagctcgggcaaggcgggcacgcactggcaccaggtgcgc
gtcttccaccagaatgtcttccccaacttcaccgtggtcaacgtggagaagccgccctgc
ttcctgcgcaagttctcccccgacggccgctacttcatcgccttctcctcggaccagacc
tcgctggagatctacgagtaccagggctgccaggcggccgaggacctgctgcagggctac
gagggggagatcctggccaacggcaacgaccagaggtccgtcaacatccgcgggcggctc
ttcgagcgcttcttcgtgctgctgcacatcaccaacgtggcctccaacggggagcacctg
aaccgcgagtgcagcctgttcacggacgactgccgctacgtgatcgtgggctcggccgcc
tacctgcccgaggagccgcacccgcccttcttcgaggtgtaccgcaacagcgagtccgtg
acgcccaacccgcgctccccgctcgaggactactccctgcacatcatcgacctgcacacg
ggccggctgtgcgacacgcgcgccttcaagtgcgacaaggtcatcctgtcgcacaaccag
gggctctacctgtacaagaacatcctggccatcctctccgtgcagcagcagaccatccac
gtcttccaggtgacgcccgaggggacgttcatcgacgtgaggaccatcggccgcttctgc
tacgaggatgatctgctgaccctgtcggccgtgtaccccgaggtgcagcgggacacgcag
acgggaatggccaacccctacaaggagcccttcatcaactccctgaagcacaggctgctg
gtgtacctttggagaagggccgagcaggatggcagtgctatagcaaagagaaggttcttc
cagtactttgatcagctgaggcagctccgcatgtggaagatgcagctcttggatgagaac
catctgtttatcaaatacaccagtgaggacgtggtcacgctgcgggtgacagatccttcc
cagccctcgttcttcgtcgtgtacaacatggtgaccacggaggtcattgccgtgtttgag
aacacatctgatgagctgctggagctgtttgagaacttctgtgacctcttcaggaatgcc
accctgcacagtgaggctgtccagttcccctgctcagcttccagcaacaactttgcgagg
cagatccagcgccggttcaaggacacgattgtgaacgccaagtacggagggcacacggag
gccgtgcggcgcctgctggggcagctccccatcagcgcccagtcctacagcggcagcccc
tacctcgacctgtccctcttcagctatgatgacaagtgggtgtcagtcatggagcggccc
aagacctgtggtgatcaccccataagattttacgcccgtgactctggcctgctgaagttc
gagatccaggcgggcctgctggggcgccccatcaatcacacggtgcggcgcctggtggcc
ttcaccttccaccccttcgagcccttcgccatctcggtgcagcgaaccaacgctgagtac
gtggtcaacttccacatgaggcacagctgcacctag
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