Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452448
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Entry
135452448 CDS
T09958
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04260
Cardiac muscle contraction
zle04261
Adrenergic signaling in cardiomyocytes
zle04814
Motor proteins
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135452448 (TPM1)
04820 Cytoskeleton in muscle cells
135452448 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
135452448 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
135452448 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135452448 (TPM1)
04147 Exosome [BR:
zle04147
]
135452448 (TPM1)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
135452448 (TPM1)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of microglial cells
135452448 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
TMF_DNA_bd
CENP-F_leu_zip
TMP_N
DUF745
Crescentin
PUMA_CC
XhlA
EzrA
DUF4200
Motif
Other DBs
NCBI-GeneID:
135452448
NCBI-ProteinID:
XP_064578568
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All DBs
Position
10:1559242..1579147
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AA seq
284 aa
AA seq
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MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLESDIVQLEKQLRGTEDTRDQV
LEELHKSEDSLLSAEENAAKAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAE
ERAELSESKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVTKLEKSIDDLEEKVAHAKEENLNMHQMLDQTLQELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccttggac
agagccgagcaagccgaagcggacaagaaggcagcggaggagagaagcaagcagttagag
agtgacattgtgcaattggaaaagcaattgcgtgggacggaggatacaagggaccaagtg
ctggaagagcttcacaagtctgaggacagcctcctctccgcagaggagaatgctgccaag
gctgagagtgaagtagcttctctgaacagacgcatccagctggttgaggaagagttggat
cgggctcaggagcgcttggccactgccctgcagaagctggaggaggctgagaaggctgca
gatgagagtgaaagaggaatgaaggtcattgaaaacagggcccagaaggatgaagagaag
atggaaatccaggagatccagctcaaagaggccaagcacattgctgaagaggctgaccgc
aagtatgaagaggtggctcgtaagctggtgatcattgagagcgacctggagcgcgctgag
gagcgtgctgagctatcagaaagcaaatgtgctgagcttgaagaggagttgaaaactgtg
accaacaacctgaagtcgctggaggctcaggctgagaagtactcacagaaagaagacaag
tatgaagaggagattaaagttctgactgacaaactgaaggaggctgagacccgtgctgag
tttgctgagaggtcagtaaccaagctggagaagagcattgatgacctagaagagaaagtg
gcgcatgccaaagaagaaaaccttaatatgcatcagatgctggatcaaactttacaggag
ttaaacaacatgtga
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