Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452798
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Entry
135452798 CDS
T09958
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135452798 (CHD9)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135452798 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
135452798
NCBI-ProteinID:
XP_064579279
LinkDB
All DBs
Position
11:complement(11080997..11152248)
Genome browser
AA seq
2893 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQ
GRNSTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVSNSQQFSSPYSYSNNHISPTSLLQPTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNATLNSSTFQMLHSAHPQGNFSSSKLSPVNINFPAS
TGSASQISHFTDPIESNGFTSLDDNLLHQVETHSEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHITPQQVTPSSELVRAPSQTQIHPWHSSVSNQHLQGRSRATLQGQP
PSKKTDGSGSYTKLQNTQVRGMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIP
RVMSPENFPSVSAEGKEEKKGRKVKSKPKDKETKKPKTGSSSKIKEKTKIGKLIITLGKK
QKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYSEEGEGKQSEEEAAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEVSAGMTVDTEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEVESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPAL
FKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQ
IQPAFPVQTSMMQLPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFE
DTKAKNENLKEDPQSSEEESMSTEETQTILKSEPLSPKNGTPIQMSDHRPSVKAETDRRM
VAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVA
SLSTTQDETQDSFQMNNGTPNSGYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDSATVASFYTTKLLDSSGAAAEYSEPTAPTPPLAAVKEEYEQSPQLSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFP
KSLPKSGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFMNRNKQPNHVNPGINS
CQVAAGINPALTYTQSQGVLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVE
DSGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENPEYGVAPEWGDVVKQSGFLPEGMFERILTGPVVREEVSRRGRRPKSEIAKA
TAAAAAASAHGVSVSPLLANGLLPGVELPGLQALQHNLHNLQSLQVTAGLMGMPAGLAAA
AGEAKNVAAMFPMLLSGMAGLPNLLGMGGLLAKSTESASEEKKGNDAKETDAKKERTEDQ
NTDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIF
DVQNSESNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDST
SSSSEDSDSSDED
NT seq
8682 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgtgcaagatgctcaa
aatcaacaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaagcttcac
tcagtaaatcagtcttttaatagctcagctgacaatgtcttatcaccacactctcagttc
aattgttcaccagttcatccgcaaaaccagtccaatgggatgtttccagatgtggccgat
ggtagtcctatgtggggtcatcaaactgccacgactgtttccaatcaaaatgggtcccct
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccacagcatcagtgtgcctcgctacggccgcagcag
ggcaggaacagcacggggcaggatgctctgagtcagccaaaagacttcatggaagtcaat
gtgtctacttccctcagagtcagtgttaaccacccaccttcagtttctaatccatcgact
tcacagcagcctctgtccgttcaacagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtccccaactattactccatgttctgtc
agtaatagtcaacaattttcatctccgtattcctactctaataatcacatttctcctacc
agccttcttcagcctacaacagctctttctaccagccagcagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaaccgagcac
atgttgaatcctaacgcaactttgaattcaagtacttttcaaatgttgcattctgcgcat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattaattttccagcttct
actggttctgcttctcagataagccatttcactgaccctattgaaagcaacggttttaca
tctttagatgacaacttacttcatcaagtggagactcacagtgaaccattcacaggactt
gacccagatgacctcttgcaggaagaccttctgccacagtttgatgactctgcctttgtc
caggatagcacaagccatgttttagagcatgacctggagcaccacataacccctcagcaa
gtgacaccgtcatctgaactcgttcgggcaccgtcgcaaactcagatccatccttggcat
tcttcagtttctaatcagcacctgcagggcaggagtcgtgcaaccttacaaggacagcct
ccttccaagaagactgatggttcaggatcatatactaagttgcagaatacccaggtgagg
ggaatgtctgaaaagaagcagaagaaaaaaacagactcggaaagtaaacaagagaaggcg
aatcgcataatatccgaagcaattgcaaaggcaaaagagagaggagagagaaacattcca
cgagtaatgagccctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaagaag
ggtagaaaagttaaatccaaaccaaaggataaggagactaaaaagccgaaaactggttcc
tcatccaaaattaaagagaaaacaaaaattggaaagctgatcatcacactgggcaaaaag
cagaaaaggaaaaacgaatcttcagatgaattgtctgatgctaagcagactccacagcgg
cccctgaaagatgaagactcacagaagagaagatcaaatcgtcaagttaaaaggaaaaaa
tactctgaagaaggagaagggaaacaatcagaagaagaagcagctaaagtttctgttaaa
atcaagaagaattctgcccctttacctgctgagcagcctttacaattatttgtggaaaat
ccaagtgaagaagatgcagcaattgtagacaaaatcttatcctccagggtaataaagaaa
gaagtatctgcagggatgacagtagacacagaagagttttttgtaaaatacaagaactac
tcatatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccag
cagaaaataaagcggttcaaagtaaggaaagcacaaagagctcacttttttgcagatatg
gaagaggaaccttttaatcctgactatgttgaggtagaccgggtattggaagtgtctctt
tgtgaagacaaagacactggtgagcctgttatttactatttagtaaaatggtgttcgttg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttccaggcctgactcgaggagattggaccgaccacctccaaac
tcctggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagggaatat
caactggaaggacttaactggctcctattcaactggtacaataggcgaaattgcatttta
gcagatgaaatgggccttggcaaaaccattcagtccattacattcctgtatgaaatcctc
ctgacgggtataagaggccctttcctgatcatagctccgctctccaccataacaaactgg
gagcgggagttccgcacgtggactgacctgaacgtcgtggtgtaccacggcagcatgatc
agcaggcagatgatccagcagtatgagatgtacttcagggactcccagggccgtattgtc
cgaggtacctacaggttccaggccattatcacaacgtttgagatgatccttggtggctgt
ccagagttaaatgcaattgagtggcgctgtgttattattgatgaagctcacagactgaag
aacaaaaactgcaaacttttggaaggactaaaattaatgaaccttgagcataaagtgctg
ttaacaggtaccccactgcagaacacagtggaagaattattcagcctccttcattttctg
gaaccattgcggtttcctgctgagtctacattcatgcaggagtttggagaccttaaaaca
gaggaacaggttcagaaactacaagctatcctgaaacccatgatgctcaggagattaaaa
gaagatgtagaaaaaaagctggctcctaaggaggaaaccataatagaagtagagctaact
aatattcagaagaaatattaccgagcaattttggagaaaaattttgccttcttatccaaa
ggagcagggcaggcaaatgtacccaacctggttaacactatgatggaactcagaaagtgc
tgtaatcacccttatctcatcaaaggtgctgaagagaagatccttggagagtttaaggaa
acatacagtccaagtgctcctgacttccacctgcaagcaatgatccagtctgctggtaaa
ttggttcttattgataagcttcttccaaaaatgaaagcaggaggccacaaggttctgatc
ttctctcaaatggtgcgctgccttgatattctggaggattaccttatccataaaaggtac
ctgtacgagcgcatcgacgggcgcgtgcggggcaacctgcggcaggcggccatcgaccgc
ttcagcaaacccgactcggatcgcttcgtcttcctgctctgcaccagggccgggggcctg
ggcatcaacctgactgcagcagatacctgcatcatctttgattctgactggaatccccaa
aatgacctgcaggctcaagcccgatgccacaggattggtcagaacaaagcagtgaaggtc
tacaggctcatcacacgtaattcctatgagagagagatgtttgacagagcaagtctgaaa
ctgggactggataaggctgtcttgcagagtatgagtggaagagaaaacagtgttggtggt
atccagcaactctccaaaaaagaaatcgaggacttgcttcgaagaggtgcctatggtgcc
ataatggatgaggaggatgagggctccaagttctgtgaggaggacattgaccagatcctg
cagcgtcgcaccaagaccatcacaatcgagtccgagggaaggggctccacgtttgccaag
gctagtttcgttgcatctggaaacaggactgatatttcactagatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaattgatattgatgctatcagtggtagaaacagcctt
gtcattgataccccaagaatcaggaagcagactcggcccttcagtgccaccaaggatgag
ctggcagagctgtcggaggtggagagtgagggggatgagaagcccaagctgcgccggccc
tgcgaccgctccaatggctatgggaggactgagtgcttccgtgtggagaagaacttgctg
gtctatgggtggggccgatggagagaaattctgtcccacggccgcttcaagaggcagctg
aacgagcacgatgtggagatcatttgcagagccctcttagcctattgccttgttcactac
agaggggatgagaaaataaagagttttatatgggatctcatcaccccaacagaggatggg
caaacacgagagttacagaaccacctcggcttatcagcccctgtgcctagaggaagaaaa
ggaaaaaaagtgaagacccaggctagcacttttgatatacacaaagcagaatggcttcga
aaatacaatccagagcatctgttgcaagatgaaggctacaaaaagcacataaaacaccat
tgcaacaaagtcttacttcgagtaagaatgctgtattacttaaagcaagaagtcattggt
aatgaattccaaaaggtctttgatggaactgatgccagtgaaattgatgtttgggttcct
gagccagaccactctgaagttcctgctgagtggtgggatgcagatgcagataaatctctt
ctaattggagtttttaaacatggttatgaaaaatacaacactatcagagcagacccagct
ctttgcttcttggaaagggttggaaaaccagatgagaaagcagttgctgctgaacagaga
gcaaatgattatatggatggagatgtggaagatccagagtataaaccagcaccagcactg
tttaaagatgacatagaggatgatgtttcatccccaggtgatctcgtaatagcagatgga
gatggacaaatgatggaaggggacaaaatctattggcccactcagtctgccttaacaacg
cggctgcgccgcctgatcaccgcttatcaacgcaccagtaaaaacaggcaggcccagcag
atccagccagcattcccagtacaaaccagtatgatgcagctgccatatgaggaagctgca
ctaaatccaaagatggctgctaagattgaaagacagcaaagatggacgagaagagaagaa
gctgacttttacagagtcgtgtccacatttggagtggtgtttgaccctgagaggggacgg
tttgactggaccaagtttcgagcaatggctcggctgcacaagaaaactgatgagagcttg
gagaagtacctgtatgcatttatgtcaatgtgcaggagggtctgtcgcctcccctcaaaa
gaagagctcgtggacccaaaccttttcatccagcccatcaccgaggaacgcgcttcccgg
actttgtaccgcatcgagctcctgcgcaaagtgcgggaacaggccctcaggcacccccag
ctctttgagaggctaaagctgtgccagccaaaccctgacctgcctgtctggtgggagtgt
gggactcacgacagggatctgcttattggagctgctaagcacggagtcagcaggacagat
tatcatattcttcgtgatcctgaactctcatttatgtctgcccagaggaactataatcaa
aacaaagtggctctctcaaggacttctactccactcttgcaccagtaccagatggcatta
tctgcttctcctcttacacctcagtcaagactgtcagatgctaaagtgaatgcttttgag
gacacaaaagctaaaaatgaaaatctgaaagaggatcctcagtcttctgaagaggaatcg
atgtctacagaggagacacagacaatactgaaatctgaacctttgagtcccaaaaatggc
accccaatacaaatgtcagaccacagacctagcgtgaaggctgagacagacagacgcatg
gtggcagcaaggacagagcctctaacgccaaacccagcttccaaaaaacagagagtcagc
aaaagggggtctgactctagctctgactcagactctgactcagatagatcatcctgttct
tccaggtcatcatcttcctcctcttcgtcttcctcatcttgttcccactctcgatctggc
tctagctcttcatcatcctcatcttgttcttcagcatcttcatcgtcctcctcgtcgtcc
tcatcgtcatcgtcgtcatcatcatcatcgtctgaagagagtgatagtgatgaagaggag
gcacaaaaacgtgcagaaggaacaccacatataaaagcctatgatgaagagagtgtggcc
tctctgagcaccacacaagatgagacacaggacagtttccagatgaacaatgggacacca
aattctggttatctcctacaaggtggatacatgttggctgcatcgtactggccaaaggac
cgtgttatgattaacagactggacagcatttgtcagacagtgctgaagggtaaatggcct
tcagcccgaaggagctacgacagcgccaccgtggcatccttctacaccaccaagctgctg
gacagctcaggggcagctgcagagtacagtgagcccactgcacccacaccccctctggca
gctgtaaaagaagaatatgagcaatctccccagctgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaag
cagggactgtctcagaaaaggccgtttgaaagcgaggagggtgcattgggtcagcagcaa
tatctggctcggctccgtgaactccagaatgcttcagaaaccagccttgtcaacttcccc
aaatcacttcccaaatcaggtacttccagtcacttaacagccagtgccaatggagtcatt
gttgacagtcagcctgtagtcaaaaagagacgaggaagaaggaagaatgtggagggagtt
gatgtcctctttatgaatagaaataaacagcctaaccatgttaatccaggtattaactcc
tgccaggttgctgcaggaataaacccagcactcacctacacacagtcccaaggcgtgctc
gatgcagagagcccagttcctgttattaacctaaaagatggaacaaggcttgcaggtgat
gatgcccctaaaagaaaagatttagaaaggtggcttaaagaacatcctggatatgttgaa
gattcaggagcttgtattcctaggatgcagctgcacgatgggaggcccaaacaaaaacga
caccgttgtcgaaaccccaacaaactggatgttaacagtttaactggtgaagaacgtgtt
cagctcataaatagaagaaatgcaagaaaggttgggggtgcatttgctcccccgctgaag
gatttgtgcagattcttgaaagaaaatccagagtatggagtggctcctgagtggggagac
gtggtaaaacagtctggcttcctccccgaggggatgttcgagcgcatcctgacgggcccg
gtggtgcgggaggaggtgagccgccgggggaggcgccccaagagcgagatcgccaaggcc
acggcggccgcggccgcggcctcggcgcacggcgtgtccgtgagccccctgctggccaac
gggctgctgcccggcgtggagctgcccggcctgcaggccctgcagcacaacctgcacaac
ctgcagtcgctgcaggtgacggcgggactcatgggaatgccggccggcctcgctgccgcc
gcgggagaggccaagaacgtggctgccatgttccccatgctgctgtcgggcatggccggg
ctgccgaacctgctgggcatgggagggctcctggcaaagtccacggaatccgcttcggag
gagaaaaagggaaacgatgcgaaggagacggatgcaaagaaggaaaggacagaagaccaa
aacacggacactggtggtgaaaactctgtttccagttctccttcgacatcctctgctgcc
gcagctgccaatcctctctctcttaaccctttacttttgtccaacatactttacccaggg
atgcttctcactccaggccttaatcttcatatcccagctttgtctcagtctaatattttt
gatgtacagaacagtgaaagcaatgacacgggctcagccaagcccacagaagaaaaggag
gaaaattctagggttagagatcaggaagacaaagggggaacagagccaagctctcacaat
gaaaacagcacagatgagggttcagagaaagcagatgcttcatctggatctgacagtaca
tcgtcttcatctgaggattcggattcgagcgatgaagactga
DBGET
integrated database retrieval system
