Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452846
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Entry
135452846 CDS
T09958
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135452846 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135452846 (EXOSC6)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135452846 (EXOSC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
135452846
NCBI-ProteinID:
XP_064579371
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All DBs
Position
11:7320391..7321928
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AA seq
279 aa
AA seq
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MPLDHRRLRGPEESQPPALWAAAAAEDEEDEEGAGAAARDPCALRPLFARAGLLSQAQGS
AYVELGSGTKVLCAAWGPREAAEPGPGRLICEFRRAPFAGRGARGRPGAAAEREAEREAA
AALREALEPAVRLGRYPRARLAVSALLLQDGGSALAAAVSAAALALADAGVEMYDLAVGC
ALCRPPAPAASWMLQPAEPEERRAAARLTLALLPALNQVSAVLGGGRGGPPEDWAQALRL
GLDGCHRQYPVLRQSLLRAAQRRDAAAAATAAAAAATSA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggatcaccgccgcctgcgcggcccggaggagtcgcagccgccggcgctgtgg
gcagcggccgcggccgaggatgaggaggacgaggagggcgcgggggcggcggcgcgggac
ccgtgtgccctgcggccgctgttcgcgcgggccgggctgctgagccaagcgcagggctcg
gcctacgtggagctgggcagcggcaccaaggtgctgtgcgccgcttggggcccgcgggag
gcggccgagcccgggccgggccggctgatctgcgagttccgccgggcgccgttcgcgggg
cgaggggcgcggggccggccgggcgcggcggccgagcgggaggcggagcgggaggcggcg
gcggcgctgcgggaggcgctggagccggcggtgcggctgggccgctacccgcgggcccgc
ctggccgtcagcgcgctgctgctgcaggacgggggctcggcgctggccgccgccgtcagc
gccgccgccctggcgctggcggacgcgggcgtggagatgtacgacctggccgtgggctgc
gcgctgtgccggccgcccgcgcccgccgcctcgtggatgctgcagcccgccgagcccgag
gagcgccgcgccgccgcccgcctcacgctggccctgctgcccgccctcaaccaggtgtcg
gccgtgctgggcggcggccggggcggcccgcccgaggactgggcgcaagccctgcggctc
ggcctcgatggctgccaccggcagtacccggtgctgcggcagagcctgctgcgggccgca
cagcgccgcgatgccgccgccgctgccaccgccgctgccgctgccgccaccagtgcctga
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