Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452916
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Entry
135452916 CDS
T09958
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135452916 (RFWD3)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135452916 (RFWD3)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135452916 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
Beta-prop_WDR5
WD40_CDC20-Fz
WDR55
Beta-prop_THOC3
zf-rbx1
zf-RING_5
Beta-prop_EML_2
Beta-prop_WDR3_1st
EIF3I
zf-UDP
zf-RING_11
Rtf2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
zf-C3HC4_4
zf-RING_Vps41
Myo5a
Beta-prop_RIG_2nd
CFAP43_N
NBCH_WD40
WD40_Prp19
Beta-prop_RSE1_2nd
zf-Nse
WD40_2
DUF7837
zf-ANAPC11
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
135452916
NCBI-ProteinID:
XP_064579512
LinkDB
All DBs
Position
11:complement(8048669..8071538)
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AA seq
755 aa
AA seq
DB search
MAQEEMEVDLHPVAGYSVGTLPALAPEPPGHAALSSHTAVLGEGGGSPAALPAHGAVVSA
GAGAGEAAAEPELQTGPALAPGGQQRLQGPLEQPQPPPVPQLTQRPPARRARRQPRLGGS
QRTIGARAALDHYFQLSRTQEPPAGAVPHPEFPRIVRDAQAQHPAETIEVSDSDSSTEEE
EEEEEEEAVEEAAAPLLPSAQETPPAASSGVSGQVQAEPPQTLSQASAVHESHEDEPEVQ
QKQTTPLKKLEASVPVAPLDEEEGDTCAICFEQWTNAGEHRLSALRCGHLFGYTCIERWL
KGQAGKCPQCNKKAKRSDIVVLYARTLKALDTSEQERMRSSLEKEQMLRRQAELESAQSR
LQLQVLTDECSKLRKQVQELKALVAQYNMSTSQQPGSSRPCLAGSLPSSQSPRKYHLEKV
FLVSQAGNCRVMAYCDSLACLVVSQPSPQSTFIPGCGVKMMSLANLKSSQYIPIHSKQIR
GLAFGTRADGLLLSAALDNTLKLTSLATNTVVQTYNTGRPVWSCCWCLDDTNYVYAGLVN
GSIMIYDLRDTNSHVQELVPQKSRCPMVSLSYLPRMASASLPYGGLLAGTLEGACFWEQR
AGNSYRPHHLALEPGGCIDLQTEINTRHCLATYRPGKNNPCMRCVMMELTCTPLTEGSED
VVCSSNPVQTFSAGPTCKLLTKNAIFQSPEDDGSVFVCAGDEASNSALLWDAGSGSLLQK
LPADLPVLDICPLEVNQRHLLATLTEKSVNIYKWQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagaggagatggaagtggatctccacccagtggccggttactcggtggggacc
ctgccggcgcttgccccggagccccctggtcacgcagcgctctcgtcccacaccgctgtg
ctcggggagggaggagggagccccgcagccctccctgcccacggtgctgtggtctcagcc
ggcgctggtgccggggaagcagctgcagagccggagctgcagacgggccctgccctggcc
cccggtgggcagcagaggctgcaggggcccttggagcagccccagcccccgcctgtgccg
cagctcacacagcgccccccggccaggagagctcgccggcagccgagactcggcggctcc
cagaggacaatcggtgccagggcagcattggaccattactttcaactcagtaggacccaa
gagccacctgcaggagcagttccacacccagagttcccccgtattgtgagggacgcccag
gcacagcacccagccgagacaatagaagtgagtgactctgacagcagcactgaggaggag
gaggaggaggaagaggaggaagcagtggaggaggcagcagcaccactgttaccatcagcc
caggagactcctccagcagcgagctcaggagtttccggtcaggtccaagcagagccacct
caaactttgtctcaagcttctgcagtacatgaaagtcatgaagatgaacctgaagtccag
caaaaacaaacaactccactaaagaaactggaggcatcagttcctgttgcacctctggat
gaggaggaaggagatacctgtgccatctgctttgagcagtggaccaatgctggggagcac
cgtctgtctgcgctgcgctgtgggcacctctttggctacacctgcattgagaggtggctc
aagggacaggcagggaagtgccctcagtgcaacaagaaggccaagcgctccgacatcgtg
gtgctgtacgcgcgcacgctgaaggcgctggacaccagcgagcaggagcgcatgagaagc
tctttagaaaaggagcaaatgctgcggaggcaggcggagctggaatctgcccagagccgt
ctgcagctccaggtgctcacagatgagtgcagcaaactccgcaagcaggttcaggagctg
aaggctctggtggcccagtacaacatgagcacttctcagcagcccggcagctcccggccc
tgcctggcaggcagcctcccctccagccaaagcccacgcaaataccacttggaaaaggtg
ttcttggtgtcccaggctggcaactgcagagtgatggcatactgtgactcactggcctgt
ctcgtggtgtcacagccttctccacagtctacttttattcctggttgtggtgtgaagatg
atgagcttggccaacctgaagagcagccagtacatccccatccacagcaaacagatccgg
ggcctggctttcggcactcgagccgatggtttgctgctctctgctgccctggacaacact
ctcaaactcaccagcttggcaacaaacactgtggtgcagacatacaatactggccgtcct
gtctggagctgctgctggtgccttgatgatacaaattatgtctatgctggattggtcaat
ggctctatcatgatttatgatctgagagacacaaactctcatgtccaagaactggtccct
cagaagtcaaggtgccccatggtgtcactgtcctacctgcccaggatggcctcagcctcg
ctgccttatggtgggctgttggctgggaccttggaaggagcctgcttttgggagcagaga
gctggcaactcctaccggcctcaccacctggccctggagcccgggggctgcatcgacctc
cagacagagatcaacacacggcactgcctggccacatacaggcctggtaaaaataaccca
tgtatgcgttgtgtgatgatggaactgacttgcaccccactgacagagggctcagaagat
gtggtgtgttcttccaacccggttcagactttcagtgctggtcccacttgcaagttgctg
accaaaaatgccatttttcagagcccagaggatgatggcagtgtctttgtgtgtgctggt
gatgaggcatccaattctgctctgctctgggatgctggaagtggttccttgctgcagaag
ctgccagctgacctgcctgtgctggatatctgccccttggaagtgaaccaaaggcacctc
ttggctactctgacagagaagtcagtgaatatctataaatggcagtga
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