Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452964
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Entry
135452964 CDS
T09958
Symbol
CDH11
Name
(RefSeq) cadherin-11
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135452964 (CDH11)
Cell adhesion molecules [BR:
zle04515
]
Cadherins
Major cadherins
135452964 (CDH11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
ASFV_J13L
DUF443
Motif
Other DBs
NCBI-GeneID:
135452964
NCBI-ProteinID:
XP_064579580
LinkDB
All DBs
Position
11:19260964..19346299
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AA seq
789 aa
AA seq
DB search
MKEERCVRAALLCLGVLCCSQGLAGERARPSLHGHRERGKEGQVLHRSKRGWVWNQFFVI
EEYTGPDPVLVGRLHSDIDSGDGNIKYILSGEGAGIIFVIDDKSGNIHATKTLDREERAQ
YTLTAQAVDRNTNRPLEPPSEFIVKVQDINDNPPEFLHENYHANVPERSNVGTSVIQVTA
SDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGG
HMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLV
AYSIIDGDGMDMFEITTDYETQEGVVKLKKTLDYETKKSYSLKVEAANVHIDPKFISNGP
FKDTVTVKIAVEDADEPPVFLKPSYIFEVQENAASGTVVGKVHAKDPDAANSAIRYSIDR
HTDLERYFVINAEDGNIKTIKTLDREEMAWHNISVFAVEVHKQHQETKVPVAIKVVDVND
NAPKFAAAYEAFVCENARSNQQFITISADDKDDSANGPRFIFSLPPEIIHNPNFTLRDNR
DNTASVLVRREGFSRQKQDLYLLPIVISDGGVPPLSSTNTLSIRVCGCDGSGSLLSCNAE
AYVLNAGLSTGALIAILACIVILLVIVVLFVTLKRQKKEPLIVFEEEDVRENIITYDDEG
GGEEDTEAFDIATLQNPDGINGFIPRKDIKPEYQYLPRPGLRPAPNSVDVDDFINTRIQE
ADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESATTDSDLDYDYLQNWGPRFKKLADLYG
SKDTFDDDS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagcgctgtgtgcgggcggccctgctgtgcctgggggtgctgtgctgcagc
caggggctggcaggggagcgcgcccggccctcgctgcacgggcaccgcgagcggggcaag
gagggacaggtgctgcaccgctccaagcgcggctgggtgtggaaccagttcttcgtcatc
gaggagtacacggggccagatcctgtgctcgtaggaaggcttcattcagatattgattct
ggagatggaaacattaaatacattctctcaggtgaaggagcaggaatcatttttgttatt
gatgacaaatcagggaacatccatgcaaccaagacactggatcgggaggagagagctcag
tacaccctgacagctcaggctgtggacaggaacacaaacagacctttggaacccccctct
gaattcattgtcaaagttcaagacataaatgacaacccgcctgagtttctccatgaaaac
taccatgccaatgtgcccgagagatcaaatgtaggtacatcagttattcaggtaacagct
tcagatgctgatgaccctacctatgggaacagtgccaaattggtttacagtatccttgaa
ggtcagccctacttctcagtggaggctcaaacaggaatcatccgaactgcccttcccaac
atggacagagaggccaaggaggagtaccacgtggtgatacaggccaaggacatgggagga
cacatgggaggcctctcagggacaaccaaagtgacaattacgcttacagatgtcaatgac
aacccaccaaagtttccacagagtgtgtaccagatgtcagtgtcggaagcagctgtccca
ggagaggaagtggggagagtgaaggccaaagatcctgacattggggagaatggcttggtg
gcttacagcatcatcgatggagatggcatggacatgtttgaaatcaccacagattatgag
actcaggaaggggttgtgaagcttaagaagaccttagattatgaaaccaaaaagtcctac
agcctgaaggtggaggcagccaatgtccacattgaccccaagttcatcagcaacgggccc
ttcaaggacaccgtgacagtgaaaatagcagtggaagatgcggatgagccaccagtgttt
ttgaagccaagttacattttcgaagtacaggagaatgcagcatctggtactgtggttgga
aaagtacatgccaaagacccggatgctgccaacagtgctataagatattcaattgatcga
cacaccgaccttgaaagatattttgttattaatgcagaagatggcaatatcaagacaata
aagactttggatagggaagaaatggcttggcataatatctctgtctttgcagttgaagtc
cacaaacagcaccaggaaaccaaagttcccgttgcaatcaaggttgttgatgtcaatgac
aacgctcccaagtttgcggctgcctacgaagccttcgtgtgtgagaatgcccgaagcaac
cagcaatttattacaattagtgctgatgacaaggatgactcggccaatggaccaagattt
atcttcagtttaccacctgaaattattcataatccaaattttacactcagagacaacaga
gataacacagcgagtgtgctggtcaggcgggaagggttcagccggcagaagcaggatttg
tacctcctccccatcgtcatcagcgacggcggcgtgcccccgctgagcagcaccaacacg
ctgagcatccgcgtgtgcggctgcgacggcagcggctccctgctctcctgcaacgctgag
gcctacgtgctcaacgcggggctcagcaccggcgccctcatcgccatcctggcctgcatc
gtcattctcctagtcatcgtggtgctgttcgtgaccctgaagaggcagaagaaggagccg
ctgatcgtgtttgaggaggaagatgtgcgggagaacatcatcacgtatgacgacgagggc
ggcggcgaggaggacacggaggcgttcgacatcgccacgctgcagaaccccgacggcatc
aacggcttcatcccgcgcaaggacatcaagcccgagtaccagtacctgcccaggccgggg
ctgcggcccgcgcccaacagcgtggacgtggacgatttcatcaacaccaggatacaggag
gccgacaacgaccccactgcccctccctatgactccatccagatctatggctacgagggc
aggggctccgtggctgggtccctcagctccttggagtcagcaacaacagattctgacttg
gactacgactatctacaaaactggggacctcgatttaagaaacttgcagacttgtatggc
tccaaagacacttttgatgacgattcttaa
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