Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452978
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Entry
135452978 CDS
T09958
Symbol
IRX6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135452978 (IRX6)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
135452978 (IRX6)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
135452978
NCBI-ProteinID:
XP_064579604
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All DBs
Position
11:complement(9884906..9889311)
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AA seq
500 aa
AA seq
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MSFSQFGYPYSTTSQVSYERFLSPRIPLAPLRPGSAEGARAAGTALRGLGASLAFLRNRA
VPIPPSFLHVTRRRPAFSSPQFFVPASPSTTCCEAAPRSGPDASSAPAAASLCCAPYESR
LLAPGRAELNAALGMYSAPYAAGQGYGNYLPYGAEPAALYTALNPQYEIKDGAGTLHSGI
AQPATYYSYDHSLGQYQYDRYGTVDFGGSARRKNATRETTSTLKTWLYEHRKNPYPTKGE
KIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGEERKEGTPREEDEYSAEGE
GREQKSYKEDKDLRFSDLEEEEEEEEEEAGKPEKGRTSSLQEAPSLGAALPEAPRSDCSL
PGPFHAFPCAKAPAADFAPASLAGPPPPYAPAEKPRIWSLARTAGARAARRGSPEGRGAE
GGGGAAGEQPLPAKAFRSSAFSLQPLPRSCASHRGLGEPCQFAAAGEGFGRGAKGGPGGT
ELGGTCLDRLRTAFRPVLRR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctctcagttcggatacccctacagcaccacttcacaggtaagctacgagcgc
ttcctgagcccgcgcatccccctcgcaccgctgcgcccgggcagcgcggagggtgcgcgg
gcagcgggaaccgcgctccgcgggctcggggcttcgctcgcgtttctgcggaaccgggct
gtgccgattcctccctccttcctccacgtcactcggcgccgtcccgctttctcctctccg
cagttcttcgtgcccgccagccccagcacgacctgctgcgaggccgccccccgctccggc
ccggatgcctcctcggcgccggccgccgcctcgctgtgctgcgccccgtacgagagccgg
ctgctggcgcccggccgcgccgagctcaatgcggcgctgggcatgtacagcgccccgtac
gccgccggccagggctacggcaactacctgccctacggcgccgagcccgccgcgctctac
accgcgctgaacccccagtatgaaatcaaagacggcgccggcacgttgcactcgggaatc
gcgcagcccgctacctactactcctacgatcattccttggggcagtaccagtacgacagg
tacgggacggtggatttcggtggttcagccagacgcaaaaatgcaacgcgagagacgacg
agtactctcaagacctggctgtacgagcaccgcaaaaacccctaccccaccaaaggagag
aaaatcatgctggctatcatcactaaaatgaccctgacgcaagtgtccacttggtttgct
aacgccagacggaggcttaagaaagaaaacaaaatgacctggtctcccaagaacaaagcc
ggggaagagaggaaagaaggaaccccgagggaagaggatgaatacagtgcggagggtgaa
ggcagagagcagaagagctacaaggaggacaaggacctgcggttcagcgacctggaggag
gaggaagaggaggaggaggaggaggcggggaagccggagaagggccggaccagctccctg
caggaagcgcccagcctgggcgcggcgctgcccgaggctccgcggagcgactgcagcctg
cccggccccttccacgcctttccttgtgccaaggcccccgccgcggacttcgcccccgcc
tccttggccggcccgccgccgccctacgcgcccgcggagaagccgcgcatctggtctttg
gcgcgcacggccggggccagagcggcgcgcaggggcagccccgagggccgcggcgcggag
ggaggcggcggcgcggcgggagagcagcccctgcccgccaaggccttccggagctccgct
ttcagcctgcagccgctcccgcggagctgcgcgtcccaccgcggcctgggggagccgtgc
cagttcgcggcggcgggcgaaggcttcgggcggggcgccaagggcggcccgggaggcacc
gagctgggtgggacgtgcctggacaggctgcggacggcgttccggcccgtgctgcggagg
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