Zonotrichia leucophrys gambelii (white-crowned sparrow): 135452995
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Entry
135452995 CDS
T09958
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135452995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135452995
03036 Chromosome and associated proteins [BR:
zle03036
]
135452995
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135452995
Coactivators
SAGA/TFTC/STAGA complex
135452995
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135452995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
135452995
NCBI-ProteinID:
XP_064579634
LinkDB
All DBs
Position
11:complement(17487345..17636940)
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AA seq
998 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKALSDLVGSLESQLAGGRGPAEPPPPRTSAPSQQPQQGS
LAGDSSPGRQQHGRPAPPPAPGAGEAAGRPGSAGSRAPAQGPLPAPSPPAAAAAAAGRGA
SVNSSSVQQSHGAAPGGGSPAAPAPPQPAAPAQPVNNHVAAAAAAARDAGSPGPGPSPPA
ADGAPGAAGGGGAAAGAAEGAAAAPAPRPGQAAPNGEGAGARPAAVPPVSGHGGAAAAQP
QPAPGALPAVTALGASASPAPAPPAPGSAPPAPAAPAAPKPAVTAKAGAALPAAPQAVSP
RPALGAAPRIVAPQLIVRPPPQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQM
QAQVQTQGQGPANMSPRLSVPTTGPVFRLSTAQQPTSVGTSSVRLGLPVQAKVVPSTAAP
ASATATLPGGAVLSHTTVTVATTSAPNLFKTTVAGGAAASQQPAVLSSAQSQGSGAGQPR
LPLPPPTAAQVPAQPLVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPET
SRNVKALVQDLLDAKIDPEEFTGRLQTELKSSPQPYLVPFLKKSLPALRQSLLNSQHLVL
QGQPSQQSLQQTKLSAVIPQSASGISSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQ
SNQSSQLQIIQSTSAQTVKRAPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGF
GVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNSDLVGSQMQSCK
DEPFLAAIPLHKRILETAKKLGITDVPAEVVTFISHATQSRLRTVIEKVTVITQHRMESY
KDDEWYEQASDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKA
KEMQQQELAQMRQRDANLTALAAIGPRKKRKLDAPGLLTIGGEGVGLCGGSPAGLGTGSP
RQYPRQKITRVNLRDFIFYMEQERDMSHSLLLYRALLK
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcgtcggacccactggaggagatgctgctcttctccgaggaggtggac
gagaaggcgctcagcgacctggtgggatccctggaatcgcagctggccggcggccgcggc
cccgctgagccgcccccgcccaggacctccgccccgtcccagcagccgcagcaggggagc
ctggcgggggacagcagccccggccggcagcagcacggccgccccgcgccccctcccgcg
cccggggcaggggaggcggcggggcgccccggcagcgcggggagccgagcccccgcccag
gggcctctcccggccccgtctcccccggcggcggcggcagcggcggcggggaggggagcg
agtgtaaacagtagtagtgtgcagcaatcacatggagcggctcccggcggcggcagcccc
gccgctcccgccccgccgcagcccgccgcccctgcccagcctgtcaacaaccatgtggcc
gctgcagccgccgccgcgcgggacgcggggagccccggccccggccccagcccgcccgcc
gccgacggcgcgcccggggccgcggggggcggcggagcagcggcgggagcggccgagggc
gccgccgctgcccccgcgccgcgccccggccaggcggcgcccaacggggagggcgcgggg
gcccgaccggccgcggtgccgcccgtcagcgggcacggcggggccgccgccgcgcagccc
cagcccgcgcccggcgcgctgcccgcggtcaccgcgctcggcgcctccgccagccccgcg
cccgcaccgccggccccgggctcggccccgccggcccccgcggcccccgccgcgcccaag
cccgcggtcaccgccaaggcgggcgctgccctgcccgccgccccccaggccgtgtcgccg
cggccggcgctgggcgctgccccccggatcgtggccccgcagctgatcgtgcggccgccg
ccgcagaccaccatccagctgccgcccggcttcaccatcccgcccgggatggtgctggtg
cgcacggacgccggacagctcgtcatggtgccccagcaggccctggcacaggctcagatg
caggcccaggtgcagacacagggacagggtcctgccaacatgtcacccaggctttctgtg
cccaccactggccctgtgtttcgcctctcaacagctcagcagccaacgtccgtgggcacc
tccagcgtccgcctggggctccccgtgcaagccaaggtggtgccatcgacagcagcgccc
gccagcgccacagccacgctgccaggaggggctgtgctgtcccacaccacggtaacagta
gctacgacgagcgctcccaacctgttcaagacgacggtggcaggtggagctgcagcctcc
cagcagcctgcagtgctcagcagtgcccagagccagggctcaggggcggggcagccacgg
ctgccactgccccctcccacggcagcgcaggtgccagcacagcccctggtcatccccagc
tcccctgtgcctggcaccaccgtggtctcacaggaaatgcaagagaatgtgaaaaaatgt
aaaaactttttagctacccttataaaacttgcttctcataattcaccatctcctgaaacg
tcccgcaatgtgaaagctctggttcaagatttgttggatgcaaagattgatccagaagaa
tttacaggccgccttcaaacagaactcaaatcatctcctcagccatatctcgtacctttc
cttaagaaaagtctacctgcactgagacaatctttactgaacagtcagcatttggttttg
caaggccagccgtctcagcagtcactccaacagaccaagctctctgcagtgatacctcag
tctgcctcgggaatctcctctgttgtcaccactcagacaataggaataaggcaaccaaac
aacatttgcacagtctctgtatcaaatacagtgcagcctcctcaggttaaggtggtacag
tcaaatcagagttctcaactgcagattatccagtcaacatctgctcaaactgtgaaacga
gcccctgcttgccagactacccagattaggatgccagtggtaataactcagaccattaga
ccacaaggcacagtagggaaggcaccaacaatacaagccagtaaaagtcctgggggcttt
ggtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccctggaggtggttctttc
agagatgatgatgacatcaatgatgttgcctctatggctggtgttaaccttaatgaagaa
agtgcccgaattatggccaccaactctgacttggttggatcccagatgcagtcctgtaaa
gatgaaccctttcttgctgctatacctctccataaacgcatacttgaaacggctaaaaaa
ctaggaattactgatgtgccagctgaggtggttacttttatttcccatgcaacacagagc
agattaaggacagtgatagagaaggtgacagtgataacccagcaccggatggagtcgtac
aaagacgatgagtggtacgaacaagcctcagacgtccgatcccagctgaagttcttcgag
cagttggagcgcttggaaaagcaaaggaaagatgaacaagagagggaaattttgctgaag
gctgccaagagtcgctcaaggcaagaagacccagagcaagctagactgaaacaaaaagca
aaggagatgcagcagcaggagctggcccagatgaggcagagggacgccaacctgacggcg
ctggcagccatcggcccccgcaagaaacggaagctggatgctcctggcctgctcaccata
ggaggagagggcgtggggctgtgcgggggcagcccggcggggctgggcacgggctccccc
cggcagtacccccggcagaaaatcactcgagtcaacctcagggacttcatcttctacatg
gagcaggagcgggacatgagccattcgctcctgctctaccgagctctgcttaaataa
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