Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453017
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Entry
135453017 CDS
T09958
Symbol
USP5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135453017 (USP5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135453017 (USP5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135453017 (USP5)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135453017 (USP5)
Peptidases and inhibitors [BR:
zle01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
135453017 (USP5)
Ubiquitin system [BR:
zle04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135453017 (USP5)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135453017 (USP5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_4
UBA_3
Motif
Other DBs
NCBI-GeneID:
135453017
NCBI-ProteinID:
XP_064579682
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All DBs
Position
1:95432158..95447500
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AA seq
855 aa
AA seq
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MAELSEALLSVLPSIRVPKAGDRVHKDECAFSFDTPESDGGLYICMNTFLGFGKQYVEKH
YQKTGQRVYLHLKRTRKPKEEDTNSSAGDPPRKKPTRLAIGVEGGFDITEEKFEYDEDVK
IVILPDHLDIPRDGLEGLPDMVKDRIASAIEAILTADSASRKQEVQAWDGEVRRVSKHAF
SLHQLQNDVRIPPCGWKCSKCDMKENLWLNMTDGAILCGRRYFDGSGGNNHAVEHYRETG
YPLAVKLGTITPDGADVYSYDEDDMVLDPNLAEHLAHFGIDMLKMQKTDKTMTELEIDMN
QRIGEWELIQESGVQLKPLYGPGYTGIRNLGNSCYLNSVMQVLFSIPDFQRKYVDKLEKI
FQSAPSDPTQDFSTQVAKLGHGLLSGEYSRPASADGEQQPDQKGMQNGIAPRMFKSLIGK
GHPEFSTNRQQDAQEFFLHFINMVERNCRSSENPNEVFRFLVEEKLKCLATEKVKYTQRV
DYIMQLPVPMDAALNKDELLEYEEKKRQAEEEKQPLPELVRAKVPFSSCLEAYGAPEQVD
DFWSTALQAKSVALKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDISALQ
GTGLQEGEEEMPDIAPPLVTPDEPKGSLGFYGNEDDDSFCSPHFSSPTSPMLDESVIIQL
VEMGFPMDACRKAVYYTGNSGVEAAMNWVMSHMDDPDFANPLVLPGSSGPGSTIACPDPP
SEDSVATIVSMGFSRDQAMKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAAES
ISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKDGRWVIYNDQKVCASEKP
PKDLGYIYFYQRIPS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgagcgaggcgctgctgtcggtgttgccgtccatccgggtgcccaaggcc
ggcgaccgcgtccacaaggacgagtgcgccttctccttcgacacgccggagtcagatggc
ggcttgtatatctgcatgaacacgttcctgggctttgggaagcagtatgtggaaaagcac
tatcagaaaacaggccagcgggtctacctgcacctcaaaagaacacgtaaaccgaaggaa
gaagacaccaactccagtgctggggaccccccgaggaagaaaccaactcgcttggccatt
ggtgtagaaggtggatttgatatcacagaagaaaagtttgaatatgatgaagatgtaaaa
atagtgattttgccggaccatttggatattccacgtgatgggctggaaggactaccagac
atggtcaaagacaggattgccagtgcgatcgaggccatcctgacagcagactcagcctca
cggaagcaggaggtgcaggcctgggatggggaggttcgccgtgtttccaagcacgctttt
tccctgcaccagcttcagaacgacgtccgcatcccaccgtgtggctggaagtgcagcaag
tgtgacatgaaggagaacctgtggctgaacatgaccgacggagccatcctctgcggtcgg
cgctacttcgacggcagcggcggcaacaaccacgcggtcgagcactaccgagaaaccggc
taccctctggctgtgaaactgggaacaatcactcctgatggggctgatgtctactcctat
gatgaggatgacatggtgttggatcccaacctggcagaacacctggcacacttcgggatt
gacatgctcaagatgcagaagacagacaagacgatgacagaactggaaatagacatgaac
cagcgcattggcgagtgggaactcatccaggagtctggtgttcagctcaagcccctctat
gggcctgggtacactggtatccgtaacctgggcaacagttgctacctcaattctgtgatg
caggtgctgttcagtatccccgacttccagagaaagtatgtggacaagctggagaagata
ttccaaagtgcaccttcggaccccacacaggacttcagcacacaagtagccaaactgggc
catggactgctttctggggagtattcaaggccagcttctgcagatggggagcagcagcct
gatcagaagggtatgcaaaatggcattgctccacgcatgttcaagtccctcattggaaag
gggcacccagaattttccactaaccgacagcaggatgcccaggaattctttctgcacttc
atcaacatggtggagaggaactgccgtagctcggagaaccctaacgaggtcttccgtttt
ctggtggaggagaagctgaagtgcctggccacagaaaaggtgaaatatacccagcgtgtg
gactacattatgcagctgcctgtgcccatggatgctgcactcaacaaagatgaactgctg
gagtatgaggagaagaagaggcaggcagaggaggagaagcagccgctgcctgagctggtg
cgagccaaggtgcctttcagctcctgcctagaggcctatggagctccagagcaggtggat
gatttctggagcacagccttgcaggccaagtctgtggctctcaaaacgacgcggttcgcc
tctttcccagattatctggtcatccagatcaagaagttcactttcggtctggactgggtg
cccaaaaagctcgatgtttccattgaaatgccagaggagctggatatctctgcactgcag
ggaacggggctgcaggaaggagaagaggaaatgccagacatcgcacccccactggtgaca
ccagatgagcccaaaggtagcctggggttctatggcaacgaggacgacgactccttctgc
tcccctcacttctcctctccgacatcacccatgctggacgagtcggtgattatccagcta
gtggaaatgggctttcccatggatgcctgccgcaaagccgtgtattacacagggaacagt
ggggttgaggcggccatgaactgggtcatgtcacacatggacgatccagactttgctaac
ccgttagttctccctggatccagtgggccagggtcaactattgcctgcccagaccctcct
tcggaagacagtgtggccaccattgtctccatgggcttctcccgggaccaggcaatgaaa
gcgcttagagccacgaacaacagtctggagcgtgctgtggattggatcttcagtcacatt
gatgacctcgatgcagaagctgctatggatatctcagaggggcgctcggcagctgagtcc
atctctgaatctgtccccgtgggtcccaaagtgcgcgatgggcctggaaaatatcagctg
tttgccttcatcagccacatgggcacttcaactatgtgcggacattatgtttgtcacatc
aagaaagatggcaggtgggtgatctacaatgaccagaaagtctgtgcttctgagaagccc
cccaaggacctgggctacatctacttctaccagcggattcccagctag
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