Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453086
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Entry
135453086 CDS
T09958
Symbol
CNTN3
Name
(RefSeq) contactin-3 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135453086 (CNTN3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zle00537
]
135453086 (CNTN3)
Cell adhesion molecules [BR:
zle04515
]
Immunoglobulin superfamily
Contactins
135453086 (CNTN3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zle00537
]
Others
135453086 (CNTN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
135453086
NCBI-ProteinID:
XP_064579816
LinkDB
All DBs
Position
12:2911274..3016818
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AA seq
963 aa
AA seq
DB search
MSPQWIEQVKPCHLKDSNTHSCETARITESRRLKMLLLLLWEQLFLVSFVGCLADVESSR
TRMRSAVSVREGQGVVLLCGTPPRAGDLSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAK
VEPSDVGNYSCVVTSRASRSPVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLAAAKGSTV
KLECFALGNPVPQINWRRTDGLPFPSKIKLRKSNGMIEIPNFQQEDAGLYECITENSRGK
NIARGRLTYYAKPHWVQPIQDVEVAVEDTLSWECRASGKPKPSYRWLKNGEQLAIEGRIQ
IENGALTISNLNLTDSGRYQCIAENKHGVISSSAELRVVASAPDFSKSPMKRLIQVQIGS
TVDFECKPRAFPKAKCSWKKGGEQLQENERISLLKDGGLRVANVTKGDAGTYTCLATNQF
GAAKGSTSLVVTEPTRITLAPSNLDVTVGESVVLPCQVQHDPLLDISFTWYFNGSLTDFQ
RDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVR
VDEITDTTAQISWQEGTDNHSPVTTYTIQARTPFSVGWQRATTVPDVIDGRTFTSTVVDL
NPWVEYEFRVVATNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPVP
EELQNGEGFGYVVAFRPSGTSTWIQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKG
EGPFSAVATVFSAEEEPSTAPSGVSATSLSSSAIQVSWTAIPWKMSNGRLLGYEVRYWNK
GQKEESSNRVKAAGNETSIKITGLRSNLDYYTAVRAYNSAGAGPFSATVNATTKKPPPSQ
PPGNVVWNVTDSRVLLSWEEVRAMDNESQVTGYKVLCRSSQGGLQELSTAGTTAELWLQL
QDDYLIEVRATTEGGDGSSSQQILIPRLASMDARGSGPSVLSIFSVSSFLATIFSLTLNS
VLC
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctcaatggatagaacaggttaaaccttgccacctgaaagactcaaacacgcat
tcctgtgagacagccagaattactgaatccaggagactgaagatgctgctgctgctgctg
tgggagcagctgttcctggtgtcatttgttggctgccttgcagatgtggagagctccagg
acgaggatgaggagcgcggtgtcggtgcgcgaaggccagggcgtcgtgctgctctgtggg
accccgccccgggctggagacctgtcgttcgcctggatcttcaacgagtacccgtcgttc
gtgcaggaggacagccggcgcttcgtgtcccaggagacagggcacctgtacatcgccaag
gtggagccctcggacgtgggcaactacagctgtgtggtgaccagcagggccagcaggagc
cccgtgctgggctcccccacgcccctggtgctgcgcacggacggtgtgatgggggaatac
gagcccaaaatagaagttcagttccctgagaccctggcagcagccaaaggctccactgtg
aagctggagtgctttgccctgggaaaccccgtgcctcagattaactggagaagaactgac
gggctgccatttccaagtaaaataaagctgaggaaatccaatggcatgattgaaatccct
aatttccagcaggaggatgcagggctctatgaatgcattactgaaaactccaggggcaaa
aacattgcaagaggacgtctcacttactatgcaaagcctcactgggtgcagcccatccag
gatgtggaggttgctgtggaggacaccttgtcctgggagtgcagagccagtgggaaaccc
aaaccctcctacaggtggctgaagaatggagagcagctggccatagagggaaggatccaa
attgaaaatggtgcacttacaatatcaaatctaaatctgacagattctggcagataccag
tgcatagctgaaaataagcatggtgtcatctcttcgagtgcagagctcagggttgtagct
tctgctccagatttttccaagagtccaatgaagagactgatccaggttcagataggcagc
acagttgattttgagtgcaaacccagagctttccccaaggccaaatgttcctggaagaag
ggaggtgagcagctgcaggaaaatgaaaggatcagcctgttaaaggatggagggctgagg
gtggccaacgtgaccaagggggatgctggcacctacacctgcctggccacaaaccagttt
ggagcagccaagggctccaccagcctggtggttacagagccaaccaggatcaccttggcc
ccttccaacctggatgtgaccgtgggggagagcgtggtgctgccctgccaggtgcagcac
gatcccctgctggacatcagcttcacctggtacttcaacgggagcctcaccgacttccag
agggatgcatcccacttcgagaaggttggagggagtgcatcaggggatctgatgatcagg
aacatccagctgaagcacagtgggaagtacgtgtgcatggtgaagacagaggtggacagc
gtggcctctgctgccgacctcatcgtgagaggctctcctgggccccccgagcacgtgagg
gtggacgagatcacggacaccacagcccagatctcctggcaggagggcacggacaaccac
agccccgtgaccacctacaccatccaggccaggacgcccttctccgtgggctggcagaga
gccaccacagttccggacgtgatcgacggcagaaccttcacgagcacagtagtggattta
aatccttgggttgaatatgaatttcgtgtagttgccaccaacaaaataggaggtggagag
cctagtttgccctcagaaaaagtaagaactgaagaggcagttcctgaaattcccccctct
gaggtcagtgggggcggaggcagcaggtctgagctggtcataacgtgggatcccgtccct
gaggagctgcagaacggggagggatttgggtacgtggtggctttccgcccctcgggcacc
tcgacgtggatccagaccgtggtgacctcccctgacacgcccagatacgtgttcaggaac
gagagcatcctgcccttctcgccctacgaggtcaaggtcggcgtctacaacaacaaggga
gaggggcccttcagtgctgtggccacggtgttctcagctgaggaagagcccagcacggcg
ccctcaggagtgtctgccaccagcctgtcctcctcagccatccaggtgtcctggacagcc
attccctggaagatgagcaatggaaggctgctgggctatgaggttaggtactggaataaa
gggcagaaagaagaatcctccaacagagtaaaagcagcagggaatgaaacgtcaataaaa
attacgggcttgaggagcaacctggactattacacagctgtgcgtgcctacaacagcgct
ggggcagggcccttcagtgccaccgtcaatgccaccaccaaaaagccaccacccagccag
cctccaggaaacgtggtgtggaatgtcacagactccagggtgctgctgagctgggaggag
gtcagagccatggacaacgagtcccaggtcacgggctacaaggtgctgtgcaggagcagc
cagggcgggctgcaggagctgagcacggcgggcaccacggccgagctgtggctgcagctg
caggacgattatctcatcgaggtcagggccaccaccgagggcggcgacggcagcagcagc
cagcagatcctcatccccaggctagccagtatggatgcaagaggttctggaccatcagtg
ttgagtatcttcagtgtctcgagcttcttagcaacaatattttccttgacccttaattct
gtgttgtgctga
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