Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453211
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Entry
135453211 CDS
T09958
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135453211 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135453211 (XPC)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
135453211 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
135453211
NCBI-ProteinID:
XP_064580072
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All DBs
Position
12:9767168..9776558
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AA seq
962 aa
AA seq
DB search
MARKRRASPRPAAAKKRRSGRLIKEEEEEQEEEEDDFEEKKPRIKKTSKAPARKKGEDCD
TEVSNSAKTSKPSKREEAKSQVKESKKNAGNKESCIKEETCSDSLKHPQKEMKLETESPV
KKEMDEENTDNDDDDDDESEDEWEDVEELQEPATDKLEEAAALPSVGLPSNPVEIEIETP
EQVKKRERREKRKAEFEMYLRRMMKRFSKEVREDTHKVHLLCLLANGFYRNRICSQPDLL
AIALSIVPVRFTQVPAGQVGLVYLSNLVKWFVGTFTVNDELSTEKGEPLQSTLERRFAIY
AAQDEEELVHIFLIILRALQLLCRLVLSFQPIPLKETRPKGKSSSKRLSHSSTSEGQESF
ATTPKAVAKACPCKKAKQDEKSSESKENSKEPKKPKTAQTKRTQKLTKGSQEQEESKNES
SSAEKDVPVRPKNDRRRRVASKVCYKEESGSDEGSASDFELSEEESDVSDEDFESVPKRR
RSSRASQNSKLTTVKRSKPETSETRQSENLCGAETKSAKITTPALPQAKKKRNKIISSDE
DEGQQEVRKAMGTDQWLEVFLEPEDKWVCVDCVHGNVGQPQLCFAHATKPLFYVVGFDND
GSVRDVTQRYDPVWMTSTRKSRVDPEWWEETLQPYESPYVERDKKEENEFQVKLQDQPLP
TAIGEYKNHPLYALKRHLLKFQAIYPETAAILGYCRGEAVYSRDCIHTLHSRDTWLKQAR
VVRIGEVPYKMVKGFSNRARKARLAEPANRDREDLALFGRWQTEEYQPPIAVDGKVPRNE
YGNVYLFLPSMLPVGCVQLKLPNLNRVARKLNIDCAQAVTGFDFHGGYSHPVTDGYVVCE
EYKEVLVAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLKQRYSIKTEPSAPE
TEKGGGFSSDEEGAPSSESTVGNTAMYWPQNRQLEKQEKIKTKKSKREKRGEAAQLFPFE
KL
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaagcgccgagcatcgccccggcccgcggccgccaaaaagaggcgttccggg
aggctgataaaggaggaggaagaggagcaggaggaagaggaggatgattttgaagagaaa
aagcccagaataaaaaagacttcaaaagctccagctaggaaaaagggagaagattgtgat
actgaagtttccaactcagcaaaaacttccaaaccttcaaaacgagaagaggcaaaatca
caagtaaaagaaagtaaaaagaatgctggaaataaagagagttgtatcaaagaggaaaca
tgcagtgactcactgaagcatcctcagaaggagatgaaattagagacagaatctcctgtt
aaaaaagagatggatgaagaaaatactgacaacgatgatgatgatgatgatgaaagtgaa
gatgagtgggaggatgtggaagaacttcaggaacctgctacagataagttagaagaagct
gctgctcttccatcagtggggctgccaagcaatcctgttgagatagagatcgaaacccca
gagcaggtgaagaaaagagagaggagagaaaaaagaaaagctgagtttgagatgtacctt
cggagaatgatgaaacgtttcagcaaggaggttcgtgaggacacacacaaggttcacttg
ctgtgtttattggcaaatggtttctacaggaacaggatctgcagccagccagatctcctc
gccatcgctctgtccatcgtccccgtgcgcttcacccaggtgcctgcaggccaagtgggc
cttgtctacctttccaacctggtgaaatggtttgttggaaccttcactgtcaatgatgag
ctttccactgaaaaaggagagccccttcagtcaacactggagaggaggtttgccatctat
gctgcacaggatgaggaggagcttgttcatatatttttaattattctgcgagctttacag
ctgctgtgtcgccttgtgctgtcttttcagcctattcctctcaaggaaacaagaccaaag
ggaaagagctcatccaagaggctgtctcacagcagcacctctgagggacaggaaagtttt
gccacaacacccaaagctgtggcaaaagcgtgcccctgcaaaaaagccaagcaggatgag
aaatcctcagagagcaaagaaaacagcaaggagccaaagaaacctaaaactgcccagacc
aaaaggacacaaaagctgactaaaggtagccaggaacaggaggaatcaaagaatgagagc
agttcagcagaaaaagatgtgccagtcaggcccaagaacgaccgccggagacgagtggcc
tccaaagtgtgttacaaggaagagagtggaagtgatgagggcagtgcttcggactttgag
ctttcagaggaggagagtgatgtctctgatgaggattttgaaagtgtccctaagaggcgg
aggagctcacgggcctcccagaattcaaaactgacaactgtgaaaaggtcaaaacctgag
acttcagaaacgaggcaatcagaaaatttgtgtggagctgagactaagtcagcaaaaatt
acaactccagccttgcctcaagcaaagaagaagagaaacaaaatcatttctagtgatgag
gatgaaggacagcaggaagtgaggaaagccatgggcacagaccagtggctggaggttttc
cttgagcctgaggacaagtgggtttgtgtagactgtgttcatggcaatgtgggccagccc
cagctgtgctttgcacatgccacaaagccacttttctacgttgtggggtttgacaacgat
gggagtgtcagggatgtgacacaaagatatgacccagtgtggatgacctccacaaggaag
agccgtgtggacccagagtggtgggaagagacactgcagccctatgaaagtccctatgtg
gagagagacaagaaggaagaaaatgagtttcaagtgaagcttcaagatcaacctctacca
acagcaattggagagtacaaaaaccaccctctgtatgcactgaagagacacctcttgaaa
ttccaggccatctatcctgagacagctgctattttggggtactgcaggggagaggctgtc
tactccagagattgcatacacacgctgcactccagggacacctggctgaagcaagctcga
gtggtgaggattggagaagtgccttacaagatggtgaaaggattttccaaccgggcgagg
aaggcgcgcctggcagagccggccaaccgggaccgggaggacctggcgctgttcggccgc
tggcagactgaggagtatcagcctcccatagcagtggatggaaaggttccccggaatgaa
tatggaaatgtgtatctcttcttgccgtccatgttacctgtgggctgtgtgcagctgaaa
ctgccaaacctcaacagagtggcacggaagttgaacattgactgtgctcaagccgtcact
ggatttgattttcatggaggctactcacacccagttactgatggctatgtggtgtgtgag
gagtataaagaggtccttgttgctgcctgggagaatgaacaagcagaaatagaaaagaag
gagaaggagaaacgtgagaaaagagctctggggaattggaagctgctgacaaaaggactt
ctcatcagagagagactgaagcaacgctactccatcaagactgagccatcagcacctgag
acagagaaaggagggggattctcctctgatgaagaaggagctccgagctcagagagcaca
gtggggaacacagccatgtattggccccagaaccgccagctggagaaacaagaaaagata
aaaaccaaaaagagcaagcgagaaaagagaggagaagcagctcagttgttcccttttgag
aaattgtga
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