Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453254
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Entry
135453254 CDS
T09958
Symbol
CNTN6
Name
(RefSeq) contactin-6 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135453254 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zle00537
]
135453254 (CNTN6)
Cell adhesion molecules [BR:
zle04515
]
Immunoglobulin superfamily
Contactins
135453254 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zle00537
]
Others
135453254 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
135453254
NCBI-ProteinID:
XP_064580142
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All DBs
Position
12:complement(2194158..2325945)
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AA seq
1039 aa
AA seq
DB search
MVLLWKLISLLPFMSCSTGEETLHGPIFIQEPYDITYSMGSANPEILLNCTAKGYPLPYY
RWKQNGTDIDLTMSYHYRLVGGSLAINNPHKNQDIGTYQCLATNSFGTILSRKAKLQFAY
LENFETRPRSPVSVREGQGVVLLCGTPPHHGALSYTWIFNNTTLDLGADSRRFVSQATGN
LYLAKVEPWDVGNYTCAVSSAEAQRQVWGAPTALSLRGDGVMGEYEPKIEVRFPETTYAA
KGSSARLECFALGNPVPSISWRRSDGKSLAKKIQHNRTGGVLEIPNVEQEDEGSYECIAA
NTRGINIARGQLFVYAPPEWDKKIQNAFLSLYDSLFWECKARGKPSPSYSWLKNGQPLMA
EERIQIENGTLLIPMLNLSDSGLYQCVAENKYDTIYANAELRVIAAAPDFSRNPVKKLSV
VQVGGEVTISCKPSASPRAAVSWRKGAEVLRHNKRVVLLEDGSLRISNISKVDAGLYTCV
ATNQFGTARNSGNLIVKDRTVITIPPSDTDATVGESIVLPCQASHDPSLDVAFSWSFNGQ
RIDLSRGIHHFERIGRESSGDLMIRNIQLHHSGKYVCMVQTSLDSQSATADIIVRGPPGP
PEDVKVEHVSSTTAGLSWKPGADNNSPVQIYSVQTRTPFSVGWQAVATAPEVINGRTLKA
TVVDLSPWVEYEFRVVASNSVGIGEPSRPSALLKTKAAVPVVAPTNIGGGGGSRSELVIT
WEPVSEELQNGEGFGYVVMFRPLGSTTWTKAVVASVESSKYIYRNESITPLSPFEVKVGV
YNNEGEGTLSSISIIYSGEDEPQMAPAGASALSVSAAVVEVSWLPIPWNRHTGRVLGYEV
LYWIDDPKESTAGKVRVSGNVTAKNITGLRANTVYFAAVRAYNTAGTGPSSTPVNVTTKK
SPPSQPPANIAWKLTNSKICLNWEHVKTMENESEVLGYKILYRQNRQSKAHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKISSLSSGAMKLSQRINPTLASGILLLG
SVLLNPFPCWFQQFSAMDF
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgctatggaaactaataagtctgctgccattcatgagctgcagcacaggggaa
gaaacccttcatgggcctatttttatccaagagccatatgatatcacttattccatgggc
tcagcaaatccagagatcctcctgaactgcacagctaaaggatatccactgccatactac
aggtggaagcaaaatggcacagatattgatcttaccatgagttatcactacaggttggtt
ggaggcagcttggcaatcaataacccacataaaaatcaggatattggaacataccagtgt
ttggccacaaattcatttggaacaattctgagcaggaaggcaaagcttcaatttgcatac
ctggaaaacttcgagacgaggccgagaagcccggtgtcagtgagagagggacaaggagtg
gtcctgctctgtggaactcccccccaccatggagccttgtcctacacgtggatcttcaac
aacaccaccctggatcttggggcagacagccggcgcttcgtttcccaggccacaggaaac
ctgtacctggccaaggtggagccctgggacgttggcaattacacctgtgccgtgagcagt
gccgaggctcagcgccaggtgtggggcgcccccactgccctcagcctcaggggcgatggt
gtgatgggggagtacgagccaaagattgaggtgcgttttccagaaacgacctacgccgcc
aagggctcctctgccagactggagtgcttcgccctgggaaatcctgtcccaagcattagc
tggaggaggtctgatggaaaatccttggcaaagaaaatccaacacaacaggactggggga
gttcttgaaatccccaacgttgagcaggaagatgaaggttcctacgagtgcatcgcagca
aacacccgaggaataaacattgcaagaggtcaattatttgtctatgcaccccctgaatgg
gataaaaaaatccaaaatgcctttctgtctctctatgacagtttattttgggaatgtaag
gcaagaggaaaaccaagcccttcctacagctggctaaaaaatggccagcccctcatggca
gaggaaagaattcaaatagaaaatgggactctcctcatccccatgctgaatctgtcagac
tcaggcctctatcagtgcgtggcagaaaataaatatgacaccatttatgccaatgctgag
ctgagggtgattgctgcagccccggatttttccagaaaccccgtgaagaagctgtctgtt
gtgcaggttggaggggaagttacaatcagttgtaagcccagtgcttctcccagagccgct
gtttcctggagaaagggtgcggaggttctgcgccacaacaaaagggtggtgctcctggag
gatggcagcctcaggatctccaacatctccaaggtggatgctgggctttacacttgtgta
gccacgaaccagtttggaactgccagaaactcagggaacctcattgttaaagacaggact
gtgatcacaattcccccctctgacacagatgcaacagttggagagagcattgtgctgcca
tgccaggcgtcccacgacccctccctggacgtggccttctcgtggtcattcaatggccag
aggattgatttgagcaggggaatccatcactttgaaaggattggaagggaatcttctggg
gatttgatgataagaaatattcagctgcatcattctgggaaatatgtgtgcatggtgcaa
acttctttagacagtcaatctgcaacagcagatataattgtgagaggccctccaggtcca
ccagaagatgttaaagttgaacatgtttctagcacaactgctggcttatcctggaagcct
ggagcagataacaacagcccagtgcagatctacagtgtccagaccaggactcccttctcg
gtgggatggcaggcagtcgccacagctcccgaggtcattaatggcaggactctcaaggcc
accgtggtggatttaagcccctgggttgagtacgagttccgcgtggtcgccagcaacagc
gttgggatcggggagcccagcaggccttcagctctcctgaaaaccaaagcagcagttccc
gtggtggcacccacgaacatcggcggaggaggagggagccgctccgagctcgtcatcaca
tgggagccggtgtcagaagagctccagaacggggaaggttttggctacgtcgtcatgttc
cgtccccttggctccacaacctggaccaaagctgtggtggcctcggtggaatccagcaaa
tacatttataggaacgagagcatcacacccctgtctcctttcgaggtcaaagttggtgtc
tacaacaacgagggagaagggaccctgagctccatttccatcatctactcaggagaggat
gagccacagatggccccggcgggcgcctcagcgctgagtgtgtcggcggcggtggtggag
gtgtcctggctgcccatcccctggaaccggcacacgggcagggtgctgggctacgaggtt
ttatattggatagatgatcccaaggaaagcacagctgggaaggtcagagtcagtgggaat
gtgacagccaaaaacatcacgggcctgagagctaacacggtgtattttgcagcagtgcga
gcctacaacactgcggggacggggccctccagcacccccgttaatgtcaccaccaaaaaa
tccccacccagtcaacctccagcgaacatcgcctggaagctgacaaattccaaaatctgc
ctcaactgggagcatgtgaaaacaatggagaatgagtctgaggtgttgggctacaaaatc
ctgtacagacagaacaggcagagcaaagcccatatcctggagacaaacaacacttcagct
gaacttctggtcccgtttgaagaagattatctcatcgagataagaaccgtcagcgatggt
ggcgatggcagcagcagtgaggaaattaggattccaaaaatatccagtttaagctctgga
gcaatgaaattatcccaaaggataaaccctacattggcatctgggatcctgctgttgggt
tctgttcttctaaacccttttccttgctggttccagcaattctctgccatggacttctaa
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