Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453304
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Entry
135453304 CDS
T09958
Symbol
RPUSD3
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X1
KO
K22537
mitochondrial RNA pseudouridine synthase RPUSD3 [EC:5.4.99.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
zle03029
]
135453304 (RPUSD3)
Mitochondrial biogenesis [BR:
zle03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
135453304 (RPUSD3)
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
E3_UBR4_N
Motif
Other DBs
NCBI-GeneID:
135453304
NCBI-ProteinID:
XP_064580247
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All DBs
Position
12:8999825..9002684
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AA seq
317 aa
AA seq
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MASTGSAAAVATAVRGLARPGPGTRAAGLAGRGAGYMGWRRLLGPKETLRLLEGSVVHRE
GALLALNKPPGLPVLGRPGDLSLDALLPALRRRLGLPAELHVVKAPAREYSGLVLLSSCY
HTTKKLQQFFTDARCRGQYPATYRAITVGVPAEVEGEISAGLSWQQQGDRAMVVPVPAPG
RRSLARKDVKSTLTRYRVLSAVGGCALLQLQPRTAFPEQLQVHLTLLLCPALGDHKHSSR
VGRVLGVPFFLSPESAPTHTQVLDEELLSQLGLSPRQLHRLPLHIHLQELVLPEGPLCAP
PPPYFLHTLRCLGLPEH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccgggagcgccgccgccgtcgccacagccgtgcgcgggctggcgcgcccg
ggaccgggaacgcgcgccgcggggttagcggggcgcggggctggatatatggggtggagg
cggctgctgggccccaaggagacgctgaggctgctggagggctccgtggtgcaccgcgaa
ggagccctgctggcactgaacaagccccctggcctccccgttctggggcgtcctggggac
ctgagcctggatgcgctgctgccggcactgagacgacgcctgggcctccctgctgagctc
cacgtggtgaaggctcctgccagggagtattctggccttgtcctcctgtccagctgctac
cataccactaagaagctccaacagttcttcaccgatgctcgttgcagaggccagtaccct
gccacgtatcgtgccatcaccgtgggagtcccggcagaggtggagggtgaaatctctgca
gggctgagctggcagcagcagggggacagagccatggtggtgccagtcccagccccagga
cgccgcagcctggccaggaaggatgtaaagagcaccctgacacgctaccgggtgctgagt
gccgtggggggctgtgccctcctccagctccagcccaggacggccttcccagaacagctc
caggtgcacctgacgctgctgctgtgcccggccctgggtgaccacaagcactcctcccgc
gtgggcagggtgctgggagtgcccttcttcctgagccccgagtctgccccgacccacact
caggtcctggacgaggagttgctgtcccagctggggctttctccacggcagctccatcgc
ctcccactccacatccacctgcaggagctcgtgctgcctgagggccccctctgtgccccc
ccaccaccgtacttcctgcacactctgcgctgtctggggctgcctgagcactag
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