Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453357
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Entry
135453357 CDS
T09958
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135453357 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135453357 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135453357 (USP16)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135453357 (USP16)
Peptidases and inhibitors [BR:
zle01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
135453357 (USP16)
Ubiquitin system [BR:
zle04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135453357 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
135453357
NCBI-ProteinID:
XP_064580400
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All DBs
Position
1:complement(96364293..96383382)
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AA seq
819 aa
AA seq
DB search
MGKKRIKVKTAQSDESPDILKPVCKHIRKGLDQGLVRKALQNVEWHVCQDCKADSKTQEK
AEEEETDEGTSIWLCLKCGHRGCDRNSPDQHALKHYETPRSDPHCLVLNLDNWSVWCYPC
DNEVPYKTSTLLGQTVDFVRKQVGIDSSHAVQKQENKEVENKKVEKDSKNKQGKEVSLKE
ENSPSTANGEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKIPGTTIKIESPELC
MEPQLIKLDQPGPLTLAMHQFVTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHEL
LRYLLDGMRAEEIQQISIGILKALSDSSKQNEEELKKKIKEYEKKKGIQSFVDRIFGGEL
TSTIMCEECRTVSLVHESFLDLSLPVLDVQKGKITKRDNVKKNKEKESEDEEDKISDHYL
KQKYEPHGTSKHLQKKMKKQAKKKAKSQRRQEKLQGKVLHLTYLCTTEQPETDVKYNQES
DTEMSSKTLDKKQGEESSHDCRDYCLTQKDLSIQGNSRELQSRHENGGMPEQEWEENESL
VDLSMEGLDSPVKFVNGLDNLSLEEEDDDNEDEEELTMDFLKLHLSASDTNTLDGLQPVP
NKTCEVSTDDPEMAFCTLANREELNPEEDSVHHCLYQFTRNEALTETNKLLCDVCTQRHC
GPKNNISEKKCVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLQKVNRHIKFPEVIDLAP
FCTAKCKNVAEGNTKVLYSLYGVVEHSGTMRSGHYTAYVKMRAMNSHLSDLVLRGQSQAS
ETEPVKGQWFHISDTHVQPVSVSKVLSSQAYLLFYERLL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaacgcatcaaagtcaaaactgcacagtctgatgagtctccagatatactg
aaacctgtgtgcaagcatattcgtaaaggactggaccaaggccttgtgagaaaggcactg
cagaatgtggaatggcatgtttgtcaggactgcaaggcagacagtaagacacaagagaag
gctgaggaggaggagactgatgaaggcacttcgatatggttatgcctaaaatgtggccat
aggggctgtgacagaaattctcctgaccagcatgctttaaagcattatgaaacaccaaga
tcagatccccactgtttggttctcaatttggacaactggagtgtgtggtgctacccatgt
gataatgaagttccatataaaacttcaacccttttgggccagactgtggattttgttaga
aaacaagttggtattgactcatcacatgcagtccaaaaacaagagaacaaagaagttgaa
aataaaaaagtagaaaaagacagcaaaaataaacaaggaaaagaagtttcacttaaagaa
gaaaattctccttcaactgctaatggagaagtcactgtgaaaggacttagtaacttgggg
aatacatgtttctttaatgcagtgatgcagaatttatcacaaactccagtcctgagggag
ctgcttaaagaagctaaaatacctggcacaacgattaaaattgagtcacctgagctatgc
atggaacctcagctaataaaactagatcagccaggtcctttaacactagccatgcatcag
tttgtgacagaaatgcaagagacaaaaaaaggggtagtgactcctaaggaactttttgct
caggtttgtaaaaaagcaatacgattcaaaggttatcagcagcaagacagtcatgaactg
cttcgttacttacttgatggaatgagagcagaagaaatccagcaaataagcattggaatt
ctaaaggcactgagtgactctagcaaacaaaatgaagaagaacttaaaaagaagattaaa
gaatatgaaaagaaaaagggaatacaaagttttgtagatcgaatcttcggtggagaatta
accagcacaattatgtgtgaggaatgcagaactgtgtccttggtccatgagtctttcctt
gatttgtcacttcctgtactagatgttcagaaaggaaaaattacaaagagagacaacgtt
aaaaaaaacaaagaaaaggaatctgaagatgaagaggataaaatcagtgaccattacctt
aagcagaaatatgagccccatggtacaagtaagcaccttcagaaaaaaatgaagaaacag
gccaaaaaaaaagccaagagccaacgccggcaggaaaaacttcaaggaaaggtgcttcac
ttgacatatctctgcacaactgaacagccagagacagatgtcaagtacaaccaagaatca
gatactgaaatgagctccaaaactcttgataagaagcaaggagaggaatcatcacatgat
tgcagagattactgcttaactcagaaagacttgagtatacagggaaatagtagagaactt
cagagcaggcatgaaaatggaggaatgccagaacaagagtgggaagaaaacgagtcactc
gtggatctctctatggaaggcttagattctcctgtgaagtttgtcaatggccttgacaac
ctgtctttggaagaggaggatgatgacaatgaagatgaggaagagcttactatggacttt
ttaaaactccacttgagtgccagtgacacaaataccttagatggccttcagcctgttcct
aacaagacgtgcgaagtatctacagatgaccccgaaatggcattttgtactctggcaaac
agggaagagctaaaccctgaggaagattcagtccatcattgtttgtatcagtttacccgt
aatgaagcacttaccgagaccaataaactactgtgtgatgtgtgtacacaaaggcattgt
ggaccaaagaacaacataagtgaaaagaagtgtgtttatactaatgccaaaaaacagatg
ctcatctctttagctcctccaattttaacccttcacttaaagaggtttcagcaggctgga
tttaatctgcagaaggttaacaggcatatcaagttcccagaagtgatagacttggctcct
ttctgtacagctaaatgtaaaaatgtggctgaagggaatacaaaggtcttgtactctctc
tatggagttgtcgaacacagcggaacaatgaggtctgggcactacactgcctatgttaaa
atgagagctatgaatagccacctctctgatcttgttcttagaggacaatctcaagcttca
gaaactgagccagtcaagggtcagtggttccacatcagcgatacccacgtacaacctgtc
tctgtgtccaaagtgctgagctcccaagcctatcttctgttctatgagaggctgctgtaa
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