Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453365
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Entry
135453365 CDS
T09958
Symbol
CCDC174
Name
(RefSeq) coiled-coil domain-containing protein 174 isoform X1
KO
K25178
coiled-coil domain-containing protein 174
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135453365 (CCDC174)
03041 Spliceosome [BR:
zle03041
]
135453365 (CCDC174)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135453365 (CCDC174)
Spliceosome [BR:
zle03041
]
Complex C
Other components
EJC/TREX
135453365 (CCDC174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
135453365
NCBI-ProteinID:
XP_064580407
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All DBs
Position
12:complement(9257971..9269263)
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AA seq
712 aa
AA seq
DB search
MDRRKKPLDVAASSLVDLKAELFRKQEEFKKEKLLKDAGVFAKPRTSNKKPSIWTKQNTG
VGNRAAKDVEQKAEEQDILDKSRKKLEEKAKLYEKMTKGDFPDEETEDLYLVDFTQKIID
KQHEVQELQQSEAAGKTSERDTDEEETQPEADIPPPEDPDEEWVDYVDFLGRSRRCMKKD
LPSLLKMDQELQGKRQEPDGNTLLSEDMRRELQRQQWEKEEEEALRKPMGPIHYEDIRDN
EARQLGVGYFAFSRDQELRHKQRATLDMLREQTLDQRNKREQLKEKRKAALDARLSKLRA
RKIKKLREAGLEEEAEKLENGEVKGAAEEPEPPRATAASRKVEVIIQERRDTKPGVPYVR
EWDKGKELMFGQWEKKQEELRDERDPEFAPPSDYFLGQKKDDYLRGRNLNSSETSSEKLE
TERAQNPQRPSVPGGSGSSTGDVPLSPQPSNSSVPVQPGSAEPSGRDTQGVSSAEDDSSD
DEDVPPPAQAYGFGARGVPPPLRGYGYSARAVPPPMPAYGYGTAQVPFPVQAYGYGAPAM
VPPMHGYGYGTPEVPFAMQAYGYGTQDVPPGMHTCGCSAQDVPPGMHTCGCSAQDVPPGM
HTCGCSSQDVPPGTQVCDLSSQDVPPGIHTCGCSSQDVPPGTHTCDCSSQEMPPGADTCD
SSTQDVPPGTEDSGCSTQDMAPPAQTDSSDTPNQEPLYQSLDDMLSYYRQVT
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcaggaagaaaccgctggacgtggccgcgtcctcgctggtggatctcaaagct
gaactcttccgaaagcaagaggagttcaagaaagaaaagctgttgaaagatgctggtgtc
tttgcaaagcccagaacctctaataagaaacccagtatctggaccaagcagaacacggga
gttggaaatcgagctgcgaaagatgttgagcagaaggcagaagagcaggatatattggat
aaatcaaggaagaagcttgaagagaaagcaaagctgtatgagaaaatgacaaaaggagac
ttcccagatgaagaaactgaggatttgtacctggtggatttcactcagaagatcatagac
aaacagcacgaagtacaggagctgcagcagagtgaagctgctgggaagacttcagaaaga
gacacagatgaggaggaaactcagcctgaagcagacattccaccaccagaggacccggat
gaggaatgggttgattatgttgatttcttgggccgatctagacgctgcatgaagaaggat
ttaccaagtctacttaaaatggatcaggagcttcaagggaaaagacaagaacctgatggg
aatactctgttatctgaagacatgagaagagaacttcagaggcagcagtgggaaaaggaa
gaggaagaagccctcagaaaacccatgggacccatacattatgaggacattcgagacaat
gaggccaggcagctcggtgttggttactttgccttttctcgggaccaagagctcaggcat
aaacaacgggcaaccctggatatgctgagggagcagacacttgatcagagaaataaacgt
gagcagctgaaggagaagaggaaagcagctctagatgcaaggctgtccaaacttcgagca
cggaagattaaaaagttaagggaagctggattagaggaagaggcagaaaaactggagaat
ggagaggtgaaaggtgctgctgaggaaccagaacctccaagagctactgcagcaagtagg
aaggtggaggtcatcatccaggagaggagagacacaaagcctggagtgccttatgtccga
gagtgggataaaggcaaagaactaatgtttggacaatgggaaaagaaacaggaagagctt
agagatgagcgagacccagaatttgcaccaccttctgattactttttgggacaaaagaaa
gatgattatctccgaggtcggaatttgaacagttctgaaacctcctctgaaaaactggaa
acagagagagcacaaaacccacagaggccatcggtgccagggggcagtggcagcagcact
ggagatgtgccgctgtcaccacagccttccaacagcagtgttccagttcagccaggctca
gcagagcccagtggccgtgacactcagggcgtgtcatcagcagaggatgacagcagcgat
gacgaggacgtgccaccaccagcacaggcttacggcttcggtgcccgaggtgtgcccccc
ccactgcggggttacggctacagcgcccgggctgtgcccccacccatgccagcctacggc
tatggcactgcccaggtgcccttcccagtgcaggcctacggctatggggcaccagcaatg
gtgccaccgatgcatgggtacggctatggcactcctgaggtgccctttgcaatgcaggcc
tatggctacggcacccaggatgtgcccccaggaatgcacacctgtggctgcagtgcccag
gatgtgcccccaggaatgcacacctgcggctgcagtgcccaggatgtgcccccaggaatg
cacacctgtggatgcagctctcaggatgtgccaccaggaacacaggtctgtgacctcagc
agccaggatgtgccaccaggaatacacacttgtggatgcagcagccaggatgtgccacca
ggaacacacacctgtgactgcagcagccaagagatgccaccaggagcagacacctgtgac
agcagcacgcaggatgtgccaccaggaacagaggacagtggctgcagcactcaggatatg
gcacctccagctcagactgacagcagtgacactccaaatcaggaaccactttaccaaagt
ttagatgatatgctctcttattacagacaagtgacttga
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