Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453382
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Entry
135453382 CDS
T09958
Symbol
SHQ1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zle03009
]
135453382 (SHQ1)
Ribosome biogenesis [BR:
zle03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
135453382 (SHQ1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Motif
Other DBs
NCBI-GeneID:
135453382
NCBI-ProteinID:
XP_064580462
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All DBs
Position
12:3425450..3483773
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AA seq
656 aa
AA seq
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MRGVPVAGRARPSAHARLRPGAGGRGKWRPERRGVQATQAVFAFPAGFIMITPAFELTQD
PDFLTVKIRVPYARASEFDIYFEGEDFKFYAKPYFLRLTLPGRIVEDGREKASYNTDEGT
FTIQLPKEVPGQYFEGLDMLTSLLAPKKSRSAKPLVEEMDAAASAELCEENEEEFDWEME
QIPYEESPPALQHPYGFGNLRSGVFQRLQDELSDVIDIKDPDQTPAEERRRRRLAAEAAK
FEPDHYLADFFEDEAIKHLLKYKPWWIDAHRKMTALQGGSHQEHDSPAFVVFSEAEREQM
RKFTNKSFLLDKRSRRHVYLGLIDILLAYCYETRVNEGDKNVESSWNIRKLSATLCWLES
FSSIHDVLVSFGRRVLCYPLHRHFELVTRALSDTAMILQLGKAAVLKCLLDIHKIFLESD
PAYILNDLFITDYCIWIQKVKSKKLAALCESLQKTTLSKSHMGLELEELEAAAVLVQQEE
KALKAAGTVSKQQLLCSESETSDSEESSSTSSSETEGSDSDEQESSTSEDGEINSLQGTL
QEERTAPLIGCNGLRQGTDTWAMEVGDGKSKVSLQSTAPPGKLIEELEMQIQSAMRLSEQ
PEGLDTAGCISQEQEGNPVPEPDRFSEDAAGKGNFLEVSPKPNPLLFLCSTNEDED
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaggggagtgcccgtagcggggcgggcacgcccgagtgcgcatgcgcggctccgcccc
ggtgcgggcgggcgcgggaagtggcggccggagcggcgcggggttcaggccacacaagca
gtgtttgcttttcctgctggattcatcatgataactccagcttttgaactgacccaggac
ccggatttccttacagtgaaaatcagagtgccttatgccagagcttcagagtttgacatt
tactttgaaggggaagatttcaagttttatgctaagccatactttctcagattgacactt
cctggaagaattgtagaggatggcagagaaaaagcatcttacaatacagatgaaggtact
tttacaattcagttgcccaaggaggttcctggccaatattttgaggggctggacatgctg
acatctcttttagcaccaaagaaatcaagatcagcaaaacctttggtagaagagatggat
gcagctgcctctgctgagctgtgtgaagagaatgaagaagaatttgactgggaaatggaa
cagattccttatgaagagagccctccagccctgcagcacccctatgggtttgggaatttg
cgctctggggtgttccagaggctgcaggatgagctcagtgatgtcattgacatcaaggat
ccagaccagactcctgcagaggaacggaggaggagacgtttggcagctgaggctgccaag
tttgagcctgatcattacctagctgatttttttgaagatgaagctattaaacatctttta
aagtacaaaccctggtggattgatgctcatagaaagatgacagccttgcagggaggaagt
catcaggaacatgacagtcctgcatttgttgtcttctctgaggcagagagagagcagatg
aggaagttcacaaataaatcttttcttctggataaaaggagccgccgccacgtatatctt
ggattaattgatattcttctggcatattgctatgagacacgtgtcaatgaaggggacaag
aatgttgaatcatcttggaacatcaggaaactgagtgcaacattgtgctggctggagagt
ttctccagcatccatgatgtcctggtgtcttttggaagaagagtgctgtgctatcccctg
cacaggcattttgagctggtgacacgtgccctcagtgacacagccatgattctgcagctg
gggaaagctgcagtgctgaagtgtctgctggacattcacaagattttcctggagagtgac
cctgcttacatccttaatgatctcttcattacagactactgcatctggatccagaaagtc
aagtcaaaaaagttggctgcactctgtgagtccttgcagaaaaccacgctcagcaagtcc
cacatggggctggagctggaagagctggaggcagcagcagtgctggtgcagcaggaagag
aaggcgttaaaagctgctggcacagtttccaagcaacagctgctttgctccgagtcggag
acaagtgactctgaagaatccagcagcacttcatcatctgagacagaaggctctgattca
gatgagcaggagtcctcgaccagtgaagatggggaaataaattctttgcaaggcacgctg
caggaggagaggacagctccacttatcggctgtaatggattgaggcagggcacggacact
tgggccatggaggtcggcgatgggaaatcaaaggtttccttgcaatctacggctcctcct
ggaaaactgatagaagaattagaaatgcaaatccagtctgcaatgagactttcagagcag
cctgaaggattggatactgcaggctgcatttcacaggaacaagaaggaaaccctgtaccc
gagcctgacagattttcagaggatgctgctgggaagggaaatttcttggaggtgtctccc
aagcccaacccgttgctttttctctgcagcacaaatgaagatgaagactaa
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