KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453412
Entry
135453412         CDS       T09958                                 
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zle03009]
    135453412 (RRP9)
Ribosome biogenesis [BR:zle03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    135453412 (RRP9)
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_IP5PC_F ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR19_1st PEP5_VPS11_N WDR54 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_Nup120_160 Troponin WD40_like
Other DBs
NCBI-GeneID: 135453412
NCBI-ProteinID: XP_064580514
LinkDB
Position
12:complement(13985801..13989295)
AA seq 478 aa
MAAAAGGRRAKAPRGAAARRRPRPAAPGADGRPRATAGRPADEEVSSDSETESPLLGRRR
REAAEEEVEETPQEKKLRLAKQYLEELRQLEEERAEDEEELEPADLIGDRLKEDVLEQRG
RLQRLVAKDVQPPDPARIRVLRGHQLPVTCLVISPDDKFIFSASKDGSLIKWEVDSGKRL
CVVPGGKKGTEERHMGHASQVLCMAISSDGKYLATGDRNKLIMIWDAATCKRLHIFTGHR
DAVSGLSFRKGTHQLYSASHDRCVKVWDVAENAYVETLFGHQDVITGLDSLSRECCVTAG
GRDGTVRLWKIPEESQLVFSGHQGSIDCIQLINEEHMVSGADDGSVALWGLTKKKPLALA
RQAHGEHGTEGLQQPCWVSAVAALRNSDLLATGSHSGCVKLWKCGEGFRKLEHLLDIPLV
GFVNSLKFSAAGDFLVAGIGQEHRLGRWWRIKEAKNSVCIIPLKQKTTASSPESPGSS
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggcggcggcggcgggcggcaggcgggctaaggccccgcgcggggcggcggcgcggcgg
cggccacggccggcggcaccgggcgccgatgggagaccgcgggcgacggccggtcggccc
gccgacgaggaagtgtccagtgattccgagacagagagcccgttgttggggcggcggcgg
cgagaggcagcggaggaggaggtggaggagacgccgcaggagaagaagctgcgcttggcc
aagcagtacctggaggagctccggcagctcgaggaggagcgggcggaggacgaggaggag
ctggagccggcggatctcatcggcgaccgcctgaaggaggacgtgctggagcagagaggc
cggctgcagcgcctggtcgccaaagatgtacagcccccagatccagccaggatccgtgtg
ctgcggggacaccagctgcccgttacctgcctcgtcatctctcctgatgacaaattcatt
ttttctgcttccaaggatggctccctcatcaaatgggaggtggacagtgggaagaggctg
tgcgtggtgcctggggggaagaagggcacggaggagcggcacatggggcacgcgtcccag
gtcctttgcatggccatttcatcggacggcaagtacctggctacgggagacaggaacaag
ctgatcatgatctgggatgccgccacctgcaagcgcctgcacatcttcacggggcaccgt
gacgccgtctcgggcctgtccttccgaaagggcacgcaccagctgtacagcgcttcccac
gaccgctgcgtcaaggtctgggacgtggctgagaacgcatacgtggagaccctgtttgga
caccaggacgtcatcacagggctggacagcctgagccgggagtgctgtgtgaccgcgggg
ggacgggacggcaccgtgcggctctggaagatccctgaggagtcacagctcgtcttctct
gggcaccagggctccatcgactgtatccagctcatcaacgaggagcacatggtgtctggt
gcagatgatgggtctgtagccctgtgggggctgacgaagaagaagccgctggcgctggct
cggcaggcgcacggtgagcacggcaccgagggcctgcagcagccctgctgggtctcagcc
gtggctgccctgcgcaacagtgacctcctggccacagggtcccacagcggctgcgtgaag
ctctggaagtgtggggaaggatttcggaaactggagcacctcttggacatccccttggtg
ggttttgtcaacagcctcaagttctcagcagctggtgacttcctggtggctggcatcggg
caggagcaccggctgggacggtggtggagaatcaaagaagccaaaaacagtgtctgcatc
atccccctgaaacagaagaccacagcctccagccctgaatccccgggcagctcctag

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