Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453504
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Entry
135453504 CDS
T09958
Symbol
NR3C1
Name
(RefSeq) glucocorticoid receptor
KO
K05771
glucocorticoid receptor
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135453504 (NR3C1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135453504 (NR3C1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
zle03310
]
135453504 (NR3C1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
135453504 (NR3C1)
Nuclear receptors [BR:
zle03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
135453504 (NR3C1)
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Gene cluster
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
135453504
NCBI-ProteinID:
XP_064580696
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Position
13:732418..794235
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AA seq
773 aa
AA seq
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MDSKELLNPLDQDETRKNALISTKGGIVMDFHPPFRGGATVQAPVSTSPLPASSQSDSSQ
QPALADFPKGLGNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFPHQGQIGISSGDTD
FRLLEESIASLNKSSSLAEDAKGTASSEGPLEPDFPGMAARGGPAESGAAVQGQVGSNGG
NLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISADDAFLLEGS
LGEDCKPPLLSDTKPKINDRGDLLPSSKMPMPQVKTEKEDFIELCTPGIKQENMGPLYCQ
ANFSGSNLLGTKVSAISIHGVSTSGGQMYHYDLNTASLSQQQDQKPIFNIIPSLPAGSEN
WNRCPGSGDEALAPLGTLNLSGRPAFSNGYSSPGMRSDVSSSPSTTSATTGPPPKLCLVC
SDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQA
GMNLEARKTKKKIKGLQQGGAAGAREAPEAAGSKSIVPASLPQLTPTLVSLLEVIEPEVL
YSGYDSSLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLM
AFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYL
CMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDS
MHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaagaattgcttaacccgttggatcaagatgaaaccaggaaaaatgcactc
atcagtaccaaaggagggatcgtgatggacttccatccacccttcaggggtggagctact
gtccaagcccctgtgtctacatctcctctccctgcatcttctcagtcagattccagtcag
caacctgctttggctgactttccaaaaggattaggaaacaatgtgcctcagccagacctt
tccaaggcagtgtcgctctcgatgggactgtacatgggtgaaacagacgcaaaagtgatg
ggaaacgaccttggatttccgcaccagggccaaatcggcatctcttctggagacacggac
ttcaggctcctggaggaaagtattgcgagcttgaacaagtcctcgagcctggccgaggac
gccaagggaaccgcgtcttctgaggggccgctcgagccggatttcccaggcatggccgcg
cgcggcggccccgcggagtcgggagctgcggtccaaggccaggtgggctcgaatggcggc
aacttgaagttgttctctgaagaccaaagcaccctggatatcctccaggatttggaattg
ccgccggtgtcgccgggcaaggagcccaacgggagcccgtggcggctggacccgttgctc
gatgacggcggcttgctgtcccccatatccgcggacgacgcctttctcctggaaggaagt
ctcggcgaagactgcaagcctcctcttttatctgacactaaacctaaaattaatgaccgt
ggtgaccttttacccagttccaaaatgccaatgcctcaagtgaaaacagaaaaggaagac
ttcatcgaactgtgtactcccggcatcaagcaggaaaacatgggcccgctttactgccag
gccaacttctccgggtcgaacctgctgggtacgaaagtctcggccatctccatccacggt
gtcagcacctctgggggacagatgtaccactatgatttaaatactgcatcgctctctcag
cagcaggatcagaaaccaatttttaatatcattccatctcttcctgccgggtcagaaaat
tggaataggtgcccgggatcgggggacgaggcgttggctccactgggaacgctcaacctc
tctggcagacctgctttctctaatggctattcaagccctggaatgaggtcagatgtaagc
tcttctccatccacaacctcagcaaccacgggaccacctcccaagctctgcctggtgtgc
tccgacgaggcctcggggtgccactacggggtcctgacgtgtggcagctgcaaagtcttc
ttcaaaagggcagtggaagggcagcacaactacctgtgtgccggcaggaacgactgcatc
atcgacaagatccgcaggaagaactgccccgcgtgccgctaccgcaagtgtctgcaggcg
ggcatgaacctggaagcccgcaagaccaagaagaagatcaaggggctgcagcagggcggc
gcggcgggcgcgcgcgaggccccggaggcggccggcagcaagagcatcgtgcccgcctcg
ctgccccagctcacgcccaccctggtgtccctgctcgaggtcatcgagcccgaggtgctc
tactcaggctacgacagctccctgcccgactccagctggaggatcctctccacgctcaac
atgctgggcggccgccaggtggtcgctgcggtcaagtgggcgaaggcgatcccaggtttc
cgaaatttgcacctggatgaccaaatgacccttctgcagtactcctggatgttcctgatg
gcttttgctctgggctggagatcctacaagcagtccaatggcaacctgctgtgctttgct
ccagacctgatcattaacgagcagaggatgaatctcccatgtatgtatgaacaatgcaaa
cacatgctcatggtggcccgagagctgtcccgcctgcaagtctcctacgaggagtatctc
tgcatgaagaccttgcttctcctctctacaattcccaaggagggcctgaagagccagtcc
ctgtttgaggagatccgcatgacgtacatcaaggagctgggcaaggccatcgtcaagagg
gaagggaactccagccagaactggcagcgattttatcaactgactaaactgctggactct
atgcatgatgtggttgaaaatcttctgagcttttgcttccagacatttttggataaatcc
atgagtattgagttcccagaaatgttggcagaaatcatcagcaatcagataccaaaatat
tccaatggaaatatcaagaagctcttgtttcatcagaagtga
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