Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453565
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Entry
135453565 CDS
T09958
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135453565
Cell adhesion molecules [BR:
zle04515
]
Cadherins
Protocadherins
135453565
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
135453565
NCBI-ProteinID:
XP_064580823
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Position
13:15892458..15898770
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AA seq
814 aa
AA seq
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MALARQVLCVCALLGLPLARAEPIRYSVAEEAESGSLVGELAEDAGLTPAQLSARRARLV
SEDGRQHFRLERASGRLVVAGRLDREQLCAQADTCMLPFELLLSDPLQFFRVEVALEDIN
DHSPVFREDRVSFKILERSDPGSRFPVEVARDLDIGRNTVQEYIISPKNEYFSVSYGTRS
PGKKYLELVLEKALDREEQTEMGFSVIAVDGGSPPRSGTTEVKIVILDVNDNAPIFTQEV
YEGQILENMPEGSVVLSVLATDPDAGVNGDISYELNEVVGQRDSLFVIDPKSGEIKMKKS
LDFEAAQTHELTVRATDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPLPENTVPGTVV
ALFTVRDRDSGANGKISCALQDQLFFSLRPAYKNYYELVTVSALDREETPQHILSVTAAD
AGSPPLTATHTFTVDISDVNDNAPVFNQTSYTMYVRENNVATVFVGAVSAADADVGLNAK
VTYSLAAEQGPERAWCSCISVNSEKGHVFVLRPLDYERLRQTEVTVSASDAGSPPLRANV
TVRLVVLDENDNAPLVLYPAQESGPASSELVPVSAEAGYLISKVVAVDADSGQNSWLSYH
LLRATDPGLFAVGLQSGEVRLRRPVTERDSVKQKLVVLVRDNGKPPLSATAALSALLLKD
FSDVRLPHSSPASEDQAAASLTTYLIIALVFVSLLFLISTAVLLARKVCRRKELKAGHVL
YAADTLQSGLADAAAAGSLPRAYCYEISLTTGSGNSEFRFLKPILPSLPPQHCAVGQGPD
EEQDSPGVPVSSEDMAPDNAGALSAGQFNALSFD
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcaaggcaagtgctttgtgtgtgtgctttgctggggctgccgctcgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtgggcgag
ctggccgaggacgcggggctgacgccggcgcagctctcggctcgccgcgcccgcctggtc
tcggaggacggccgccagcattttcgcttggagcgcgcctccggccgcctcgtcgtggcg
gggaggctggaccgggagcagctgtgcgcccaggccgacacctgcatgctccccttcgag
ctgctgctctccgaccccctgcagttctttcgggtcgaggtagccttggaggatatcaat
gatcattcgcctgttttccgagaagatcgagtcagttttaagatcctggaaaggagtgac
ccaggctctcgtttcccagtggaggtagctcgagacctcgatattgggaggaacacagtc
caggagtacataatctcccccaagaacgagtatttcagtgtttcgtatgggactcgcagt
ccaggcaaaaagtatcttgaacttgtattggaaaaggcactagaccgagaggagcagaca
gagatgggtttcagtgttattgccgtggatgggggctcgccaccaaggagtggcactacc
gaagtgaaaattgtaattctagatgtaaatgacaatgctcccatattcacacaggaggtg
tacgaagggcaaattttggagaacatgccagaaggctctgtggtgttgagtgtactggca
actgatccagatgcaggagttaatggggacatctcctatgaactcaatgaagtcgttggt
cagagagactcattatttgtgatagaccccaaaagtggtgaaattaaaatgaaaaaatct
ctggactttgaggcagcacaaactcatgagctgactgtgagggctacagatggaggaggg
ctgtcagcaatctgcaaggtgttggtggaggtggtggatgtgaatgacaatgccccagag
ctggtggtcagttccttcagcagtcccctccccgagaacacagtgcccggcacggtggtt
gccctgtttacagtcagggaccgggattctggtgccaacgggaagatctcctgtgccctg
caggatcagctcttcttctccctgaggccggcctacaagaattactatgagctggtgaca
gtgagtgcgctggaccgcgaggagacgcctcagcacatcctcagtgtgacggcagcagat
gcgggctcgcctcctctcaccgccacgcacaccttcaccgtggacatctccgacgtcaat
gacaatgcccccgtcttcaaccagacctcctacaccatgtacgtgcgtgagaacaacgtg
gccacggtgtttgtgggagccgtgagcgctgcagatgctgacgtggggctgaatgccaag
gtgacctattccctggcagcagagcaagggccagagcgggcctggtgctcctgcatctcg
gtgaactcggagaagggacacgtgtttgtgctgcggcccctggactacgagcgcttgagg
cagaccgaggtgacggtcagtgcctctgacgcgggctctcctccgctgagagccaacgtc
accgtgcgcctggtggtgctggacgagaacgacaacgccccgctcgtgctctacccggcc
caggagagcggcccggcctccagcgagctggtgcccgtgtcggccgaggcgggctacctg
atcagcaaagtggtggccgtcgatgccgactcgggacagaactcgtggctctcctaccac
ctgctcagggccaccgacccaggcctgtttgccgtgggcctgcaaagcggcgaggtgcgt
ctcaggaggccggtgacagagagagacagcgtcaagcagaagctggtggtgctggtcaga
gacaacggcaagcccccgctgtcagccacggcagctctcagcgctctcctgctcaaggac
ttctccgacgtgcgcctgccgcacagcagcccggccagcgaggatcaggccgctgcctcc
ctgaccacctatttaatcattgccttggtctttgtctccctcctcttcctcatctccacg
gcagtgctgctggctcgcaaggtgtgcaggaggaaggagctgaaggctggccatgtgctc
tatgctgccgacaccttgcagagcggcctggccgatgcggccgctgcagggagcctgccc
cgcgcctattgctacgagatcagcctcaccacgggctcgggcaacagcgagttcagattc
ctcaagcccatcctgcccagcctgcccccacagcactgcgccgtgggccagggccccgat
gaggaacaggattcccctggtgtccctgtcagcagcgaggacatggccccagacaatgct
ggcgctctctctgcaggacagttcaacgctctttcctttgactag
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