KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453566
Entry
135453566         CDS       T09958                                 
Symbol
KDM3B
Name
(RefSeq) lysine-specific demethylase 3B
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zle03036]
    135453566 (KDM3B)
Enzymes [BR:zle01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     135453566 (KDM3B)
Chromosome and associated proteins [BR:zle03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    135453566 (KDM3B)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 135453566
NCBI-ProteinID: XP_064580825
LinkDB
Position
13:complement(47022..95119)
AA seq 1742 aa
MADAAASPVGKRLLLLLAAGPGEGETAGSEPGPALPARAWRSGTVRAMSGAVPQDLAIFV
EFDGCNWKQHAWVKVHAEEVIVLLLEGSLVWAPRNDPVMLQGTRISQAQWPALTFTPLVD
KLGLGSVVPVEFLLDRHLRFLSDASGLRLFQMGTESQNQILQEQPSLRESVNALISDQKL
QEIFSRGPYSVQGQRVKVYQPEDENSWLCGVVSHQDPISRLMEVSVTESGEIKSVDPRLI
HVVMDNTSPGEGGGLKATKSSSKGKKKKESLEGKDGRRRKNVSDPGCDPATKKLKERGEA
DSNGSDGGEASRGPWKGVSGSETGLDPRAKQLPSFLPQISRNIRFATYTKENGRTLVVQD
EPVGDTPLPFTPFSSVAGQPLQVGSGCKEAGKSLEQVQGTVTSATAVTTTALTPTTVRIS
DTSLPAVSGQEKLKTVRSQAQGENSRNSLLASSGFGVSLPSASQSLIFGAGRSQSNGVMA
PESKPSGFPFGCGTGQEAQKDSDSSKNLFFQCMSQNLPSSNYFTVISESLTEDVSSRDSF
KQCTESVGAGTCKGKILSVDCKPGAQSGSSVERKLPVESMPTLTPAFSRSLLNTRPSDSH
ENLFLQPPKLSREEPSNPFLAFAEKAEFSPFSGFASSSQTGICAPSTPVGHKATSGWPES
LTCTDSLAKKKTLFITTDSSKMISSASGSTATAGVQSPSTVGNGRSSSPSSSLTQPIEMP
TLSSSPTEEKPAVGPGQQDNPLLKTFSSVFGRHPPTLFSSQAEFPQEKKAPFEAVKRFSL
DERSLTSKQDSDSSTNSDLSDLSDSEDQLQAKACMKGIPDHLMAKLGPNVERNAELLLGK
GKGKQAPKGRPRTAPLKVGQSVLKDMSKVRKLKQSGEPFLQDGSCINVAPHLHKCRECRL
ERYRKFKEQEQDDSTVACRFFHFRRLVFTRKGILRVEGFLNPQQSDTDAMSLWIPSSSPA
EGVDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLF
NIHWVCRKCGFGVCLDCYRLRKNRPRSDTEEIGDEEVFSWLKCAKGQSHEPENLMPTQII
PGTALYNIGDMVHAARGKWGIKANCPCINRQNKSVLRPAVTNGISQLPTVNPSASVSGNE
NAFSTGAGTAGVGQVEMDTVPKSEATDIRIEESAKAETLPTSNTGEVKSNRPLCPETAPS
SALHWLADLATQKAKEETKESGSLRSVLNKESHSPFGLDSFNSSTKVSPLTPKLFNSLLL
GPVTSSNKAEGSSLRDLLHTGPGKLPQVPSDTGIPFPPVFSAASTGVKGKASLPNFLDHI
IASVVENKKTSDAAKRASNLADTQKEVKEMVMGLNVLDPHTSHSWLCDGRLLCLHDPSNK
NNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVDLVNCRNCAIISDVKV
RDFWDGFEIISKRLRSDDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDG
RLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGE
GSHDDEVLKTIDEGDADDVTKQRIHEGREKPGALWHIYAAKDAEKIRELLRKVGEEQGQE
NPPDHDPIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIK
VAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHESKLA
RS
NT seq 5229 nt   +upstreamnt  +downstreamnt
atggcggacgcggcggcctctcccgtggggaagcggcttctgctgctgctggcggcgggg
ccgggcgaaggcgaaacggcggggtcggagccggggcctgcgctgcccgcacgggcctgg
cggagcggcaccgtgagggccatgagcggagcggtgccccaggacctggcgatctttgtg
gaattcgatggctgtaactggaaacaacatgcgtgggtgaaagtccacgctgaagaagtt
atagtgttgctgctggaagggtcattggtttgggcacctcgaaatgatcctgttatgctt
caggggactagaatctcgcaggcgcaatggcctgcgctgacctttactcctctagtagat
aagctggggttaggctctgtggtcccagtggagtttcttctggacagacatttacgtttc
ctgtctgatgccagtggattacgtttatttcagatgggaacagagagtcaaaatcagatt
ctacaggagcagccttccctaagagaatctgtcaatgcgctgatcagtgaccagaagctt
caggagatatttagtagaggtccttacagtgtccaaggccagcgagttaaagtttatcaa
ccagaggatgaaaatagctggctctgtggtgttgtgagccatcaagatccaataagtcgt
cttatggaagtgtctgtgactgagagtggtgagatcaagtcggtggatcctcgactgatt
cacgtggtgatggataacacttctccaggcgagggagggggcctaaaagcaactaaatca
tcatctaaagggaaaaagaagaaggaaagcctggagggaaaggatggaaggaggaggaaa
aatgtatcagatcctggttgtgatcctgcaacaaagaagctgaaggagaggggtgaggca
gatagcaatggtagtgatggaggtgaggcaagcagaggtccctggaaaggagtctccggt
agtgaaacaggactggatccaagggccaagcagttgccttcatttcttcctcagattagt
cgcaatattcgttttgctacttacaccaaagagaatggccgaacattagtagtccaagac
gagccagttggtgacacaccattgcccttcactccattttcttctgtggctgggcagcca
ttacaagttggatctgggtgtaaagaggcaggaaaatcactggaacaggttcaaggtaca
gtgacttctgcaaccgcagttactacaactgctttgacaccgacaactgtgaggatctct
gataccagtttgcctgctgttagtggacaggagaaactgaaaacagtccgatcgcaagcc
cagggagagaattcccgaaattcacttttggcttcttctggatttggagtctctctccca
agtgcttcccagtccttgatatttggggctggaaggagccaatcaaatggagtgatggct
ccagaaagcaaaccttctggatttccttttggctgtggtactggacaagaggctcaaaaa
gattctgattcatccaagaacttattttttcagtgcatgtcccagaatcttccttccagt
aactatttcacagtcatttcagagagcttgactgaagatgtctctagtcgagactcattc
aagcagtgtacagagagtgtgggtgctgggacttgtaaaggtaaaattctttcagtggac
tgtaagccaggagcccagtctggtagttctgtagagcggaagctgcctgtggaatctatg
cctacccttactccagccttttcacgaagtctgttgaatactcgtccctctgatagccat
gaaaacctatttttacagcccccaaagctgtcacgagaggaaccctcaaaccctttcctg
gcatttgctgagaaagcagaattcagtcctttcagtggctttgcatcttcatctcagaca
gggatttgtgctccgtcaacacctgtgggccataaggccacttctggctggccggaatca
ctcacctgtacagactctttagctaagaagaaaaccttgtttataacaactgactcctca
aagatgatctctagtgcttctggttcaacagctactgctggtgttcaaagcccttccact
gtagggaatggccgttccagctcaccgagcagcagcctgacacagcctattgagatgccc
acactatcctccagtccaacagaagaaaaaccagctgttgggcctgggcagcaggacaat
cctcttctgaaaactttttccagtgtgtttggccgacatccacctacccttttctcttca
caagcagagtttccacaggagaagaaagccccttttgaagctgtgaaaaggttctcgcta
gatgagcggagcttaacgtccaaacaggactctgactccagtacaaatagtgatctgtca
gatttgagtgactctgaagaccagttgcaggctaaggcttgtatgaagggtatcccagac
catttgatggcgaagctaggccccaatgtggagcgcaatgcagaattactgctgggtaaa
ggaaaggggaagcaagccccaaagggccggccccgcacagctcccctaaaagttggccag
tctgtgctgaaagatatgagtaaggtgaggaagctgaagcagtcaggtgagccttttctc
caggatggctcttgcatcaatgtagctccacatctgcacaagtgtcgggagtgccgtctg
gagcggtaccgcaaatttaaggagcaagagcaggatgactcaactgtggcatgtcgcttc
ttccatttccggaggctggtatttacccggaaaggtatactacgagtagaaggtttcttg
aacccgcaacaaagtgacactgatgctatgagcctatggattccttcttcctcccctgca
gagggggtcgatctggaaacttccaaatatatcctggccaatgttggggaccagttctgc
cagcttgttatgtcagagaaggaggcaatgatgatggtggagccacatcagaaggtggca
tggaagcgagcagtacgtggtgtgagggagatgtgtgatgtatgtgagacaacactcttt
aatattcattgggtttgtcggaagtgtggttttggcgtctgtctggactgttaccggctg
aggaagaatcgtccacgtagtgatacagaggagattggtgatgaagaagttttctcatgg
ctgaagtgtgcaaagggtcagtctcatgaaccagagaatctcatgccaacacagatcatc
cctggtacagcactttacaatattggagacatggttcatgcagcacgaggcaaatggggt
attaaggccaactgtccatgtattaacagacagaacaaatcagtgttgagaccagctgtc
actaatggaatatcacagcttccaactgtaaatcctagtgcatcagtctctggaaatgag
aacgccttttccactggagcagggacagcaggagtggggcaagtagaaatggacactgta
ccaaaatctgaagcaactgacattaggatagaagaatctgcaaaagcagagacattacca
accagtaacactggggaagtaaagtctaacagaccactttgtccagaaacagctccatcg
tcagctttacactggcttgcagatttagcaacgcaaaaagcgaaagaggaaacaaaagaa
tcaggatcactgagatcagtgcttaataaagaatcccattcaccctttggattagattcc
ttcaactccagtacaaaggtttccccgctaaccccaaagctgtttaatagcctcttgttg
ggcccagtgacatctagcaacaaagctgaaggctccagcctcagagatctgctacacaca
gggccaggaaagcttcctcaggtcccatcagacacaggaatcccctttcctccagtcttt
tctgcagcttctacgggggtcaaaggtaaagccagcctgccaaacttcttggaccatatc
attgcttctgtggtggaaaataagaagacgtctgatgccgcaaaacgagctagtaattta
gctgacacacagaaggaggtgaaggaaatggtaatgggattaaatgtgctggatccacac
acttcccactcttggctgtgtgatggtagacttctttgccttcatgatcccagcaataaa
aacaactggaagatcttcagggaatgctggaaacaaggccagcccgtgctggtatctggt
gtccataagaagttgaagtcagaactttggaaaccagaagctttcagcctggaatttgga
gatcaagatgtagatttggtgaactgcaggaactgtgccataatttcagacgtgaaagtg
cgtgacttctgggatggctttgagataatatctaaacggctcaggtcagatgatggtcag
ccaatggtactaaagttaaaggattggcctccaggggaggacttcagagatatgatgcct
acaaggtttgaggacttgatggaaaatcttcctcttcctgaatataccaagagagatggc
agactgaatttggcttctaggctgccaagctactttgtccgtcctgacttgggtcctaaa
atgtacaatgcgtatggcttaattactgcagaagacagacgagttggtaccacaaacctg
cacttggatgtgtctgatgctgttaacgtcatggtgtatgttgggattcccattggggaa
gggagccatgatgatgaggttctgaaaacaattgatgagggagatgctgatgatgtaaca
aagcagcgaatccatgaaggaagagagaaacctggagcattgtggcacatctatgctgcc
aaggatgctgaaaagatacgggaacttctccggaaggttggagaagaacaaggccaagaa
aatcctccagatcatgaccccattcatgaccaaagctggtacttggaccagaccttacgt
aagagactatatgatgagtatggtgtgcaaggctgggcaatagtgcagttccttggtgat
gccgtgttcattcctgcaggtgctccccatcaggtccataatttgtacagctgcattaaa
gtggcagaagattttgtatctcccgaacacgtgaagcactgcttccgtctgacccaggag
ttcaggcatctgtctaatactcatacaaaccatgaggataaactgcaggtgaagaacatt
atctaccatgcagtgaaagatgctgttggcacactgaaagctcatgaatctaaactagct
agatcgtag

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