Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453590
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Entry
135453590 CDS
T09958
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135453590 (SYNPO)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
135453590
NCBI-ProteinID:
XP_064580865
LinkDB
All DBs
Position
13:complement(6395919..6410094)
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AA seq
988 aa
AA seq
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MALQGGKSSGSCQRDLRGLNGEAPQPPVNGSSLALAEEPAAPPKCPGSATELPPTAENPS
QEWKVVKIQRVLINPDFEPRKTGLSRSASLSEKELKEAKARSQRIAAQLTTAPGPSSKGV
LLFHRRRQRVEGLTGAGHGGGQPLSPAEPRPRQGAMEHSQGQGMKPEPGQPGNPGEGMLA
NASPCQELPAEAQQVPLSVYLKENMAAAATNGVQEQAAGGMERGVEGLGNAAAPAGPNPL
PAFVLPQSPEEGKNGKVPGEVPAEMPAEVPAEVPSEVPSAPAGTATGMAPPGGQQQNGTQ
GRQYYEVHLTLAKPKPVKNRTARPFGTQASPASAQPAEEPPAPELPPPPTYAETLSSPPP
LTRVRSPPAYSALYPSQVQKVLPDPLLGCGVSGPNPLPKTGILEESAARRGSRKSMFTFL
EKPKLSPNPDLLDLVQSADSRKKQKEHGEPSTEDEPFALGAEASNFVPNSTARGVQHLPP
AEDAPAWSSCLKSPTIQPKKKPQPSHILTEARGKGAELFARRQSRMEKFIIEAPSQPELL
RSPSPTMSLPPSWKYDNNAYLSPMVSRRPSKSPCRPSKTPPASLYGNNLMESEVSQKELE
ISRHQPYQLQSSLFILSPSKGPARSIPQEVPPPRPSLPDSYPCPQQASCPASPLPPSPVW
HPPVVPSAGQGSASPFPSAAGALPLAQESRASPAAPAEALLASPCRLLPPRAKAGFQAPR
PSYSTRNAGIEPQDRRSSLPASPTWTPRLARRPGSLDGWASPASVPELDEGPPTSPPWSE
RSLSPLRQDAEPRASRQMQARLARNIINAARRKSSSPKALGLESSRPFTPIPAGPPSLPQ
SPRLGPRAPALQAAGSALGSLGSPSPTHRSPLRSPRAGSPQPCASPGIPRAAWAEGRRLL
PPSSASPCPVARLSPVPKSPLPSPVVGGRSSAKRGTSRSPTDSDVSLDSEDSGTKSPGIH
SFNLCPRGWSSSLRLKTGALPSGAPCTS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcagggagggaaatccagtgggagctgccagagagacctcagggggctcaat
ggggaggcaccacagcccccagtgaatggcagcagcctggccttggcagaggagcctgca
gcccccccaaagtgccctggctctgccacagagctgccccccacagcagagaatcccagc
caggagtggaaagtggtgaagatccaacgggtcctcatcaaccctgacttcgagccaagg
aaaacaggtctctcccgcagcgccagcctctcggagaaagagctgaaggaggcgaaggcg
cggagccagaggatcgcggcccagctcaccacggcgcccggccccagctccaagggcgtg
ctgctgttccaccggcgccggcagcgcgtcgaggggctcacgggggccgggcatggcggg
gggcagcccctgagccccgcggagccccggcctcgccaaggagccatggagcacagccag
ggccagggcatgaaaccagagcctggccagcccggcaatcctggagaagggatgctggca
aacgcctccccgtgccaggagcttcctgccgaagcccagcaggtgccactcagcgtttac
ctgaaggagaacatggcggcagccgccaccaacggcgtgcaggagcaggcggccggcggg
atggagagaggggtggaggggctcggaaatgcagcagcccctgcggggccgaaccccctg
ccagcttttgtcctgccacagagccccgaggaggggaagaacggcaaagtgcctggggag
gttcccgctgagatgcccgctgaggtgcccgctgaggtgcccagcgaggtgcccagcgcg
ccagcgggcacagccacagggatggcacccccaggagggcagcagcagaacgggacacag
ggccggcagtactacgaggtccatctcaccctggccaagcccaagcccgtgaagaaccgg
acagccagacccttcggcacccaggcatcccccgccagcgcccagccggccgaggagccc
cccgcccccgagctgcccccaccaccaacctatgcagagaccctcagcagccccccaccc
ctcacccgtgtccgctccccccctgcctactcggccctgtaccccagccaggtgcagaag
gtgctgccggatcccctcctgggctgcggggtgagcggaccaaaccccctgcccaaaact
gggatcctggaggagtcggctgcacgcagaggcagcagaaagtccatgttcactttcttg
gagaagccaaagctgagccccaaccccgacctgctggacctggttcagagtgcagacagc
aggaagaagcagaaggagcacggggagcccagcaccgaggatgagccctttgccctcggg
gctgaagcttccaactttgtccccaacagcacagccaggggtgtgcagcacctcccacca
gctgaggatgctccagcgtggtcttcctgcctcaagtctcccaccatccagcccaagaag
aagccacagcccagccacatcctcactgaggcaagagggaagggggctgagctctttgcc
cgccgacagtccaggatggagaagttcatcattgaggccccctcccagcccgagctgctg
cggtcaccatcgcccaccatgtccctgcctccctcctggaagtatgacaacaatgcctac
ctgtcacccatggtctccagacgcccctccaagagtccctgcaggccctccaaaacccct
cctgcatcgctgtatggcaacaacctcatggagagcgaggtgtcccagaaggagctggag
atctcccggcaccagccttaccagctccagtcttctctcttcatcctctccccatccaag
ggcccagcaaggtccataccccaggaggtgcctccacccagaccctctcttcccgactcc
tacccctgtccccagcaagcctcctgcccggcctctccgctgcctccttctccggtgtgg
catccccccgtggtgcccagcgccggccagggcagtgccagccccttccccagcgctgcc
ggggctctgcccctggcccaggagagccgagccagccctgcagccccggccgaggcgctg
ctggcctcgccctgccgcctgctgccgccgcgggctaaggcggggttccaggcaccccga
ccctcctactccaccaggaacgccggcatcgagccgcaggacaggcgctcgtctctccct
gcatcgcccacctggacgccccggctggcgcggcgcccgggcagcctggacggctgggcc
agcccggcctcggtgcccgagctggacgaggggccccccacgtcccctccgtggagcgag
cggtcgctgtccccgctgcggcaggacgcggagccccgcgccagccggcagatgcaagcg
cggctggccaggaacatcatcaacgccgcccgcaggaagagctcctctcccaaagcgctg
gggctggagagctcccggcccttcacccccatccccgccgggccccccagcctgccccaa
tcgccccggctggggccgagagcgccggcgctgcaggcagcgggcagcgcgctggggagc
ctgggcagcccctcgcccacccacaggagccccctgcgctcgccgcgggccggcagcccc
cagccctgcgcctcccccgggatcccccgggccgcctgggccgaggggcgccggctcctg
ccgccgtccagcgcctctccctgccccgtggcccggctgtcccccgtccccaagagcccc
ctgccatcccccgtggtgggcgggcgctcctcggccaagcgcggcacctcccggtccccg
acggactcggacgtctccctcgactccgaagactcggggaccaagagcccgggaatccac
agcttcaacctgtgtccgcggggctggagcagcagcctgaggctgaagacgggggctctg
ccctcaggggctccctgcacctcctag
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