Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453591
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Entry
135453591 CDS
T09958
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135453591 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zle03041
]
135453591 (RBM22)
Spliceosome [BR:
zle03041
]
Complex B
Other components
Prp19-related factors
135453591 (RBM22)
Complex C
135453591 (RBM22)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
RRM_PARP14_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
135453591
NCBI-ProteinID:
XP_064580866
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All DBs
Position
13:6381159..6388657
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AA seq
420 aa
AA seq
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MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPSAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcgctgggctccaacacttacaaccggcagaactgggaggatgcggatttc
cctatcctgtgccagacgtgtcttggagaaaatccctacattcggatgaccaaagaaaaa
tatggaaaagaatgcaagatttgtgccaggcccttcacggtgttccgctggtgccccggc
gtgcggatgcgcttcaagaagacagaagtgtgccagacctgcagcaagctgaagaatgtc
tgtcagacctgcctgctcgacctggagtatggtttgcctatccaagtccgggatgcagga
ctctcccttaaggatgaaatgccaaaatctgatgtcaacaaagaatactacacccagaac
atggagcgagagatagccaattctgatggcaccagaccagttggtgcactaggaaaagct
acttctaccagtgacatgctgctgaagctggcccgaaccactccatactacaaacgcaac
cgtcctcacatctgttccttctgggtgaaaggagagtgcaagagaggagaggagtgtccc
tacagacatgagaaaccaacagatccagatgatcctctggctgaccagaacatcaaggat
cgttactatggaattaatgatcctgtggctgacaaacttctgaaacgagcatcaaccatg
cctcgtctagatcctcctgaagacaagactattactacactgtatgttggagggcttgga
gataccatcactgaatcagatctcagaaatcacttctaccagtttggggagatccggacg
atcacggtggtgcagaggcagcaatgtgctttcatccagtttgccaccaggcaggctgca
gaggtggctgctgagaaatccttcaacaaactcatcatcaacggccgcaggctcaacgtc
aaatggggaaggtcccaggcagcaagaggaaaagaaaaggacaaggaaggcactacagaa
tcggggataaagctggagcccgttccaggacttcctggagccctcccccctcctccagct
gcagaagaggaggcttctgcaaattacttcaatctacctccaagtggcccttcagccgtg
gtgaacattgccctgccaccccctcctggcatcgctccaccgccgcctccaggttttgga
ccacacatgttccacgccatggggcccccacctcccttcatgagagccccaggccccatc
cactacccatcccaggatccccagaggatgggtgcccacgcaggaaagcacagcagcccc
tag
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