Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453637
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Entry
135453637 CDS
T09958
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135453637 (CDX1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
135453637 (CDX1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
135453637
NCBI-ProteinID:
XP_064580961
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Position
13:complement(6572003..6586050)
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AA seq
259 aa
AA seq
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MYVGYLVDKDTNMYPSPVRHPGLNLNPQNYVPGPPQYSDFASYHHVPGINSELHHGQPAA
AWASPYTPAKEDWHSYGTAAAPSTASPGQFGFSPPDFNPIQPPGSGLLPPPISSSVPQLS
PNGQRRTPYEWMRRSIPSTSNNGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LAAALGLTERQVKIWFQNRRAKERKVNKKKLQQQSQPTSTTTPTPPAVSTLGPIGGLCSS
NAPNLVSSSPLTIKEEFMP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggatatcttgtggataaggacaccaacatgtatcccagccccgtccggcac
cccggcctcaacctcaacccccagaactacgtgccgggcccgccgcagtactcggacttc
gccagctaccaccatgtgccgggcattaacagcgagctgcaccacgggcagcccgcggcg
gcctgggcctcgccctacacccctgccaaggaggactggcattcctacggcaccgccgcg
gccccttccaccgccagccccggccagttcggattcagccccccagattttaatcccatt
cagcctccgggctctggactcctgcccccacccatcagcagctcggtgccgcagctgtcc
cccaatggccagagacgcaccccgtacgagtggatgaggcgcagcattcccagcaccagc
aacaacggcaagaccaggacaaaagacaagtaccgggtggtgtacacggaccaccagcgc
ctggagctggagaaggagttccactacagccgctacatcaccatccgccgcaaggccgag
ctggccgcggcgctggggctcaccgagcgccaggtgaaaatctggtttcagaaccggagg
gcgaaggagaggaaggtgaacaagaagaagctgcagcagcagagccagcccaccagcacc
accacaccaaccccaccagctgtcagcaccctgggacccattggaggcctctgcagcagc
aatgcccccaacctcgtctcctcatctccgctgacgatcaaggaagaattcatgccttaa
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