Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453664
Help
Entry
135453664 CDS
T09958
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135453664 (SOX30)
Transcription factors [BR:
zle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135453664 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
135453664
NCBI-ProteinID:
XP_064580990
LinkDB
All DBs
Position
13:4452803..4460168
Genome browser
AA seq
622 aa
AA seq
DB search
MERRVRHCRFRARASPASPPRHREVMGPLGGLRVQVQEHPSRPGHSEGAAKKSRCIPAPA
AVEKEARGAIRRERDQERGSGDRQNEEKVLEQTGNKSWRRSAVQSERPNVTFETRPVKAE
KSDAPAGSLCELGNPAQDQNIPVLFQSLPPRSHVQLQGPLSAQLMHVTPVPVKQVPVQLQ
PLLQRPKIETKNVPLTVLPSDSGMPDTPFSKTKSGRVKRPMNAFMVWARIHRAAVAKANP
GANNAEISVQLGLEWSKLTEEQKQPYYEEANKIKLRHREEFPGWVYQPNKKKCSPPPGSA
AFSGTSQSTITTNPAGTLPFSSPTYSFVNSSVKNSIGRPVCESPAIRLPASSIQHAVPMT
LFQTTAASTTSVAVAVPTLPLRPVVSSQPFAEPAQTEAFVSPGLNFSLKRPAPVFAESFS
NRNPSNISSTSGRFSVSNSEMPGISVFPRGIALPQATPFIPSPAYVSAPIGQPASLFGGT
PQFPFCHPSFIPGPRCFPSSTFPLRAPFGYGSFSSSVPQCFGFYEERNQRQEVIFSTVDE
DYRFRAYSEERLCENQRVCGSPEVVSCQSTCSEERVLSPLPQLDVEVVEEVLPSPPSTPS
STYIVNVTDSDEEEEVKFFQVL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagggtcaggcactgccgcttccgcgcccgggcgagccccgcctcgcccccc
aggcacagggaggtcatgggccccctcggagggctgcgcgtccaagtgcaggagcacccg
agccggcccgggcacagcgaaggagcggcgaagaagagcaggtgcatcccggctccggcg
gcggttgagaaagaggcccggggtgccatcaggagagaaagggaccaggaaaggggcagc
ggtgaccgccagaacgaggagaaggtcctggagcaaacggggaataagtcctggagaaga
tctgccgtccaaagcgagcgacccaacgtgaccttcgagacccgcccagtgaaggcggag
aagagcgatgccccggccggatccctgtgcgagcttgggaaccctgctcaagatcagaat
atcccggtcttgtttcagtccttgcctcccaggtcccacgttcagctccagggcccgctt
tccgcgcagctgatgcatgtgactccagtgccggtaaaacaagtgccagtccaattgcag
cctctactgcagcggccaaagattgaaacaaaaaacgttcccctcacagtcctgccctcg
gattcaggaatgcctgacactcccttcagcaagaccaagagtggccgtgtgaagcgtccc
atgaacgccttcatggtgtgggcccggatccacagggctgctgtggccaaagccaaccca
ggggccaacaacgccgagatcagcgtccagctcggcctggagtggagcaaactcactgag
gagcagaagcagccctattatgaggaagctaacaaaataaaactgaggcacagggaggaa
tttcctggttgggtttatcagccaaacaaaaagaagtgttctccaccacctggctctgct
gcattttcaggcacttcccagagtaccatcactacaaatccagctggcacccttcccttc
tcatcacctacttactcttttgtcaactccagtgttaagaacagtattggacgtccagtc
tgtgaatctcccgccatccgtctgccggcctcttccatccagcacgctgtgcccatgacc
cttttccagaccacggctgcaagcaccacttcagtggctgttgcagttcccaccctgccc
ctgcgccctgtagtttcatcacagccctttgctgagcctgctcagacagaagcttttgtg
tcacctgggctcaatttctccctgaagagacctgcgcccgttttcgctgagagcttcagc
aacagaaacccgagtaacatcagcagcactagtggcaggttttctgtctccaacagtgag
atgccagggatttctgtatttcctagaggcatagctcttccccaggctacccctttcatt
ccctcacctgcctacgtgtctgctcccattggacaaccagccagtttgtttggaggaact
cctcagtttccattttgccacccttcctttatacctggacctcgctgtttcccctcaagc
acattcccactcagagctccgtttggctacgggagtttctccagctcggtgcctcagtgc
tttggcttttatgaggagaggaaccagaggcaggaggtgatattttccactgtggatgaa
gactatcgtttcagggcatactcagaggagaggctctgtgagaaccagcgtgtctgtggg
agccctgaggtcgtgtcctgtcagagcacctgcagcgaggagcgcgtcctgagccccctg
ccccagctggacgtggaagtggtggaggaggttttgccatcccccccatctactccctcc
agcacttacattgtcaatgtaaccgatagtgatgaggaagaggaagtcaagttttttcaa
gtattgtaa
DBGET
integrated database retrieval system
