Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453752
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Entry
135453752 CDS
T09958
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135453752 (RNF130)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135453752 (RNF130)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135453752 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
SP24
zf-ANAPC11
PspB
AbrB
Prok-RING_4
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
135453752
NCBI-ProteinID:
XP_064581152
LinkDB
All DBs
Position
13:6773321..6822790
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AA seq
426 aa
AA seq
DB search
MSWRWARQHWNGGSSVLLLLPLLLWHGRVRPAGADNASQAYYTALINVTVLSPERGGPTL
LRIDRGRYGQDSPKVEVKGLLVTPVPINGVADRLGCDPRTRFQVPPNTKQWIALLQRGNC
TFKEKILRAASHNATAVVIYNNVSSEEPVTMTHQGTGDIVAVMITESKVKEILNYLEKNI
SVLMAIAVGSRVPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRR
LGDAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKICVDP
WLSEHCTCPMCKLNILKALGIVPNVPCTDNVAFDMERLTRGQPASRRSALGDFGTDSSLS
LEPLRTSGMSQLPQDGELTPRSGEINIAVTSSHFFHRNSLSPRSLVYESEFSTIEPALDM
YDENKT
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcggtgggctcgccagcactggaacggcggctcctccgtgctgctgctgctg
ccgctgctgctgtggcacggccgggtccggccggccggcgccgacaacgccagccaggcg
tactacaccgcgctcatcaacgtgaccgtgctgagccccgagcgcggcggccccacgctg
ctgcggatcgaccgcggccgctacgggcaggactccccgaaggtggaggtcaaggggctg
ctggtgactcccgtccctatcaacggagttgcagatcgtctgggctgtgaccctcgaaca
cgtttccaggtccccccaaacaccaagcagtggattgctttgctacagagaggaaattgt
acatttaaagagaaaatactgcgagcagcttcacataatgccacagctgtggtcatttac
aacaatgtatccagtgaagaacctgtcacaatgactcatcaaggaactggagacattgtt
gctgtcatgattacagagtcgaaggttaaggagatcctgaattacttggaaaagaacatc
tctgtgctgatggccatagcagtggggtcccgtgttcctccaaagaacttcagccggggc
tctctagtctttgtgtcaatatcattcattgttttgatgatcatttcttcagcatggtta
atattttacttcatccagaagatcaggtacacaagtgcacgtgacaggaatcagcgtcgt
cttggagatgctgccaagaaagccattggtaaattgacaaccaggacagtaaagaagggt
gataaggaaacagacccagactttgatcattgtgctgtctgcattgagagttacaagcag
aatgatgttgttcgcattttgccgtgcaagcacgtattccacaaaatctgtgtggatcca
tggctcagtgagcactgtacatgtccaatgtgtaaactgaacattctgaaggcactggga
attgtgcccaacgtgccgtgcacagataacgtcgcctttgacatggagaggctgacgcgg
gggcagccggcgagcaggcgctcggcgctcggcgacttcggcaccgacagctccctcagc
ctggagcccctgcgcacctcgggcatgtcacagctgccacaggacggggagctgacacca
aggtcaggagagatcaacattgcagtgacaagcagtcacttcttccatcgtaactctctg
tcccctcgaagcctggtctacgagagcgagttctcaaccatcgagcctgccttggacatg
tacgacgagaacaaaacctga
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