KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453817
Entry
135453817         CDS       T09958                                 
Symbol
LARP1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zle03019]
    135453817 (LARP1)
Messenger RNA biogenesis [BR:zle03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     135453817 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 135453817
NCBI-ProteinID: XP_064581280
LinkDB
Position
13:complement(5211892..5256849)
AA seq 1050 aa
MATQVEALLPGTAPLLPAEERALVLKPPQDGGREKGEPPMGPDGGPAAPRPPSAKQQKEE
SNNQEKESLLRAGGEAEDGGEAGGAGRREFIEAPPPKVNPWTKNAPAVNGQSPPDIFPAD
GQSELTTPAKVVRAANPRQRKGSKVGDFGDATNWPTPGEIAHKSVQQPHKPPSLRKLPVK
KDMKEQEKGDGSDGKESLKTKSDESGEEKNGDDDNQKSAQKKKGNKHKWVPLQIDMKSEV
PRDKTASRNNRQNEQHRHPSNNRTELKGWHPDNKHERSWQDHDETSSVKSEGGAVRGTFR
GRGRGRGRGRGRGRGGHFDYQYGYRKFEGSDGSRTQKYASNITYYFDNISSAELYSVDQE
LLKDYIKRQIEYYFSVDNLERDFFLRRKMDSEGFLPITLIASFHRVQALTTDISLIIKAL
KDSKVVEIVDEKIRRKEQPEKWALPGPPMADYTQTDFSQFINCPEFVPRQSFQKETESAP
GSPRPASPVPTKTEEVSNLKTMPKGLSTSLPDLDSETWIEVKKRPRPSPARPKKPEESKT
PQQQKQKDQDEPEELDFLFDEEMEQMDGRKNTFTDWSDEDSDYEIDDRDVNKILIVTQTP
PYLRRHPGGDRTGNHTSRAKMSSELAKVINDGLYYYEQDLWTEQFEPEYSQIKQEVENFK
KVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGVPEPSTIARSLPTT
VPESPNYRNARTPRTPRTPQLKDPTQTPRFYPVVKEGRTIDAKTPRKRKTRHSSNPPMEC
HVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVY
HKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLAVEDGKEGYRYG
LECLFRYYSYGLEKKFRPDIFKDFQEETIKDYEAGQLYGLEKFWAFLKYSKAKNLDINSK
LQEYLSKFKRLEDFRVDPPMGEEGGHKRYPTTSGGDGRKRYPSQSSSKTVSQCPSSQGHA
SPSQPAQEDAKNLSQQSPAPSAAESQTVGK
NT seq 3153 nt   +upstreamnt  +downstreamnt
atggcgacgcaggtggaggcgctgctgcccggcacggccccgctgctgcccgccgaggag
cgcgccctggtgctgaagccgccgcaggacggcggccgggagaagggcgagccgcccatg
ggccccgacggcgggccggcggcgcccaggccgcccagcgccaagcagcagaaggaggag
agcaacaaccaggagaaggagagcctgctgagggccggcggcgaggcggaggacggcggc
gaggcgggcggcgcggggcgccgggagttcatcgaggccccgccgcccaaggtgaacccc
tggacgaagaacgcgccggccgtgaacgggcagtcgcctcccgatatatttccagctgat
ggccagtctgaacttacaactccagcgaaagtggtgagggctgccaacccaagacagagg
aaaggaagcaaggttggtgactttggtgatgccacaaattggccaacacctggagaaata
gcccacaagagtgtgcagcagccacacaaaccaccatcccttcggaaactgcctgtcaag
aaagacatgaaagagcaggaaaagggagatgggagcgatggcaaagagagcctgaaaacc
aaatctgatgagtctggggaggagaagaatggtgatgatgacaaccagaagtcagcccag
aagaagaaaggcaacaaacacaagtgggtccctctgcagatagacatgaagtcagaggtg
cccagggacaaaacagcctctcggaacaaccggcagaacgagcagcacaggcacccctcc
aacaaccgcaccgagctcaaaggctggcaccctgacaacaagcacgagcgcagctggcag
gaccacgacgagacctccagtgtgaagagcgagggaggcgccgtgcgaggaaccttccgg
ggccggggccgtggccggggcaggggcaggggccgtggcagaggagggcactttgactac
cagtatgggtaccggaaattcgagggctcggacggctcccgcacgcagaagtacgccagc
aacatcacctactacttcgacaacatcagcagtgctgagctctacagcgtggaccaggag
ctgctcaaggactacatcaagaggcagatagaatattacttcagtgtggacaacctggag
cgggatttcttcctgcggcgcaagatggactcggaggggttcctgcccatcacgctgatc
gccagcttccaccgtgtgcaggcactcaccactgacatcagcctcatcatcaaggctctg
aaggacagcaaggtggtggaaatcgtggatgagaagatcaggagaaaagagcagccagag
aaatgggctctgcctggccctcctatggcagactacacacagacagacttctcacagttc
atcaattgccccgagtttgtgccccgacagagcttccagaaggagactgagtctgctcca
ggctccccacgtcctgccagcccagtccccaccaaaacagaggaagtcagcaacctgaag
acaatgcccaagggcctgtccacaagcctgccagacctggattcagagacatggattgaa
gtgaagaagagaccccgaccttccccagccaggcccaagaaaccagaggagtcaaagaca
ccacagcagcagaagcaaaaggaccaagatgagcctgaggagctcgacttcctctttgat
gaggagatggagcagatggacgggcgcaagaacaccttcaccgactggtcagacgaggac
tcggactacgagatcgacgaccgcgacgtgaacaagatcctcatcgtgacccagaccccc
ccgtacctgcgccgccaccccggcggggacaggactggcaaccacacctccagggctaaa
atgagctcagagctggccaaggtcatcaatgatgggctctactactacgagcaggacctg
tggacagagcagtttgagccagagtattcgcagatcaagcaagaggtggagaacttcaag
aaggtgaatatgatcagcagggagcagtttgacaccctgaccccagagccccccgtggac
ccaaaccaggaagtccctcctggtccccccaggttccagcaagtacctacagacgctttg
gccaacaagctcttcggagtccctgagccttccaccatcgcccgctctctgcccaccacc
gtcccagaatcgcccaactaccgcaacgcccgcacgccgcgcaccccgcgcacgccgcag
ctcaaggaccccacgcagacgccccgcttctaccccgtggtgaaggagggcaggacgata
gatgccaagaccccgcggaagaggaagacgaggcacagttcgaaccctcccatggagtgc
cacgtgggctgggttatggactccagggagcacaggcccaggactgcctccatcagctcc
agcccctcggaggggaccccggctgtggggagctatggctgcaccccgcagtccctgccc
aagttccagcatccctcccacgagctgctcaaggagaacggcttcacacaacacgtctac
cacaagtaccggcggcgctgccttaacgagcggaaacgactgggcattggtcagtcccag
gagatgaacacgcttttccggttctggtccttcttcctccgagatcacttcaacaagaaa
atgtatgaggagttcaagcaactggctgtggaggatgggaaggagggatacaggtacggt
ctggagtgccttttcagatactacagctacgggctggagaagaaattccggccagacata
tttaaggacttccaagaagagaccatcaaggattatgaagctgggcagctctatgggctg
gaaaagttctgggccttcttaaaatattccaaagccaaaaatctggacattaacagcaaa
ctgcaagaatacctcagcaagttcaagcgcctcgaggacttccgagtagatccacccatg
ggggaggaaggtggacacaagcgataccctacgacgtcagggggagacggcaggaagcgc
tacccatcccagtcttccagcaaaacggtcagccagtgcccatccagccaaggccacgcc
tcacccagccagcctgcacaagaggatgccaaaaacctgagccagcaatcccctgcccca
tcagctgcagagtcgcagacagtggggaagtag

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