Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453928
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Entry
135453928 CDS
T09958
Symbol
RHBDL1
Name
(RefSeq) rhomboid-related protein 1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135453928 (RHBDL1)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
135453928 (RHBDL1)
Peptidases and inhibitors [BR:
zle01002
]
Serine peptidases
Family S54: Rhomboid family
135453928 (RHBDL1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580
Motif
Other DBs
NCBI-GeneID:
135453928
NCBI-ProteinID:
XP_064581553
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Position
14:complement(1700825..1706770)
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AA seq
372 aa
AA seq
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MDRSSLLQLIQEQLDPENTGFIGVETFASLVHSHELPLDPAKLDMLVALAQGNDEGQVCY
QELVDLISSKRSSSFKRAIANGQRALPRDVLLDETGLGIYKRFVRYVAYEILPCEMDRRW
YFYQHRTCPPPVFMAAVTLTQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAW
RFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISFLYLAGVLAGSLTVSITDMRA
PLVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLP
ASGPQPSFMAHLAGAIVGISMGLTILRSYEESLQDQCGWWVLLLSYGTFLLFAVFWNIFA
YDLLGAQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagctccctgctgcagctcatccaggagcagctggaccccgagaacaccggc
ttcatcggcgtggagaccttcgccagcctggtgcacagccatgagctgcccctggacccc
gccaagctcgacatgctggtggccctggcacagggcaacgacgagggccaggtctgctac
caggagctggtagacctgatcagcagcaagcgctccagcagcttcaagcgcgccatcgcc
aacgggcagcgggcgctgccccgcgacgtgctgctggacgagaccggcctgggcatctac
aaacgcttcgtccgctacgtggcctacgagatcctgccctgcgagatggaccggcgctgg
tacttctaccagcaccgcacctgccccccgcccgtgttcatggccgccgtcaccctcacc
cagatcatcgtgttcctgtgctacggggcccggctgaacaagtgggtgctgcagacctac
caccccgagtacatgaagagccccctggtctatcaccccgggcaccgcgcccgcgcctgg
cgcttcctcacctacatgttcatgcacgtggggctggagcagctggggttcaacgccctc
ctgcagctgatgatcggggtgcccctggagatggtgcacggcatcctgcgcatcagcttc
ctctacctggccggggtcctggcaggctccctcaccgtctccatcacggacatgagggcg
cccctggtcgggggctcggggggggtctacgccctctgctctgctcaccttgccaacgtc
gtcatgaactgggccgggatgcgctgtccctacaagctgctgcggatggttctggcgctg
gtgtgcatgagctccgaggtcggtcgcgctgtctggctccgcttctcgccgccgctgccg
gcctcgggcccccagcccagcttcatggcgcacctggcgggggccatcgtgggcatcagc
atggggctgaccatcctgcgcagctacgaggagagcctgcaggaccagtgcggctggtgg
gtgctgctgctctcctacggcaccttcctgctcttcgccgtcttctggaacatcttcgcc
tacgacctgctgggggcacagattccccccccgccctag
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