Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453941
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Entry
135453941 CDS
T09958
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04010
MAPK signaling pathway
zle04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135453941 (CACNA1H)
04020 Calcium signaling pathway
135453941 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135453941 (CACNA1H)
Ion channels [BR:
zle04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135453941 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
135453941
NCBI-ProteinID:
XP_064581572
LinkDB
All DBs
Position
14:complement(14385022..14546477)
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AA seq
2396 aa
AA seq
DB search
MSAGESREAPRPAEVRVPITALPAPRRPAEQPPEDAGSGSGSASGSGSGSPGREPPAELG
SEEEEQVPYPALAPTAFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPC
EDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGM
MEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFI
FGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRPDEAEENPFICSSHRENGMQRCS
NIPSRKESKVECTLSMESYSPSLASPEPSRNSCINWNQYYNICMAGDVNPHNGAINFDNI
GYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSE
TKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTIRLYNNWQS
KRRKKVNPNSSGSGGQSQRSRRRITSIHHLIHHHHHHHHHHYHISNGSPRGPRANPELCE
LELQVMKPGRQLMLPPPASPRPQGPAGAVHSIYHADCHVEGPPGGCRAASSPVGTKLAGL
GSQGSMNYPTILPSPGGRAGSAALPKGKKNGNSPVAVGNSPGSLGLDSYGKLQQLVGEHG
LRRTPSRLSGLSAAGALPSAGGPGLSCELQDCPFCASLLDDPEFALSDSDSNGDSDSNGV
YEFTQDLRHGDHRDQLQQQRGRRRRKKKKAKERNKVVKLWKAFGTKLKRIVESKYFNRGI
MIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGIFGYIKNPYNI
FDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFC
MLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVV
LYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFE
DEFEKLKDLRATEMKMYSLAVTPNGHLEGRGAMPPPIILRTAATPMPTPKCSPHLDSLHA
LGDSRRGSNASLDPTGYDQKSLSSLRSSPCANWATSSTWGSRRSSWNSLGRAPSLKKKNQ
SGERESLLSGEGKGSTDDDSDDAKSGSPSRLSPPRRAESLDRRGSQELLPELLRVPSVRQ
LGPGPAALLPAEFRGCNGKMGAELFLRVDGHKEDALDYEDDGEDSYCYRIRKALEPYKPQ
WCKTHENWSLYLFSPQNRFRVTCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPLSTE
RIFLSVSNYIFTAIFVVEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMA
SAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIF
GILGVQLFKGKFYYCDGPDVKNITTKADCTNAHYKWVRRKYNFDNLGQALMSLFVLSSKD
GWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQH
QEAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYADYSPARRYIHSLCTSHYLDLFI
TFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEALLKLVAFGFRRFFKDRWNQ
LDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVV
QALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFLTLFR
VSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHL
EESNKEAKEDAEMDAEIELEMSRGTGGSRSGAVAGESRALHGNLEQPKEKHQGLGSAASL
RAQDSQNLLTVRKISVSRMHSLPNDSYMFRPVAPATAPLPLHEVEMETYPCKAQRGSISS
TRSQPVGGSSSLRVPAEDGRHRWKGLVPHGSPRSPALSKLLCRQVRGHQHTEEAVRTDSV
DGQTPEHKDSQQAEPGEPQPSAKQPQSTLTASPLHSPLPATPPRSPPSSPHRALGPLARK
HTCGQHGVPSRPPSPSSPPGPEGCQAEPSDLADEEVRHINSSAKDWAEEHSDPGSRSTSP
FTSPAPSPVPLKNCSTSSLSRREKDLKKFYSTDTKGFLSKPSWADEQRRHSIEICPSGGA
PEPAEDKQRPPGHIQPEADYIHGARRKKKMSPPCISIDPPMEDEGAAAPRTKPSENTLLR
RRTPSCEFPAYRESLELPESRGGEHLSIPNFSFEQLDGGGSLSSLSELRDSGQPTPASLD
SRPDAEPRKQEHLKTQRGNNGKEGGKELLGTAKSPPRKQDLGPVTVATEEGTDEPV
NT seq
7191 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggcgagagccgggaagcgccgcgcccggccgaggtgcgggtgcccatcacg
gcgctgccagcgccgcgccgccccgccgagcagccgcccgaggatgccggcagcggctcc
ggcagcgcctccggctccggcagcggctcccccggccgagagccgcccgccgagctgggc
tccgaggaggaggagcaggtgccttacccggcgctggcacccaccgccttcttctgcctc
aagcaaaccacccgcccgcgcagctggtgcctcaggctggtctgtaacccctggttcgag
cacgtgagcatgctggtgatcctgctcaactgcgtcaccctgggcatgttccagccctgc
gaggacgtggagtgccagtccgagcgctgcaccatcctggaggcgtttgatgatttcatt
ttcgccttctttgccgtggaaatggtcatcaagatggtggccctgggcatctttgggcag
aagtgttaccttggagacacctggaaccgcctggacttcttcatcgtcatggcagggatg
atggaatattccctggatggccacaacgtcagcctgtccgccatccgcaccgtgcgcgtc
ctgcggcccctgcgcgccatcaacagggtccccagtatgaggatcctggtcacgctgctg
ctggacactctgcctatgttaggcaacgtcctcctcctctgcttcttcgtcttcttcatc
tttggcattgttggggtccagctctgggcagggctgctgaggaacaggtgcttcctagac
aggaattttgccatgacgtacaacctgaccttcctgcacccctactaccggccggacgag
gcggaggagaaccccttcatctgctcctcgcaccgggagaacggcatgcagaggtgctcc
aacatccccagcaggaaggagtccaaggtggagtgcacgctgagcatggagtcctacagc
cccagcctggccagccccgagcccagcaggaactcctgcatcaactggaaccagtactac
aacatctgcatggccggggacgtcaacccccacaacggggccatcaattttgataatatc
ggatatgcctggattgctatttttcaggtgataaccctggaaggatgggtggacatcatg
tattacgtgatggatgcacactctttttacaattttatatattttatattgcttatcata
gttggctccttcttcatgatcaacctgtgcctggtggtgattgccacccaattctcagag
accaagcagcgggagaaccagctgatgcaggagcagcgggcgcgctacctgtccaacgac
agcaccatcgccagcttctcagagccgggcagctgctatgaggagctgctcaaatacatc
tgccacatcttcaggaaggtgaagagaaggaccatccgcctctacaacaactggcagagc
aaacgccggaaaaaagtcaaccccaacagcagcggcagcggtgggcagagccagcggagc
aggaggagaatcacctccatccaccacctgatccaccaccaccaccaccatcaccaccac
cactaccacatcagcaacgggagcccgcgggggcctcgtgccaaccccgagctctgcgag
ctggagctgcaggtgatgaagccgggccggcagctgatgctgccgccgcccgcctcgccc
aggccgcagggccccgccggcgccgtgcacagcatctaccacgccgactgccacgtggag
gggcctccggggggctgcagggccgccagcagccccgtgggcaccaaactggccgggctg
ggcagccagggcagcatgaactaccccaccatcctgccctcgcccggcggcagggccggc
tcggcggccttgcccaaagggaagaagaacgggaattctccggtggccgtggggaacagc
cccgggagtctgggcctggattcgtacgggaagctgcagcagctggtgggagagcatggt
ctccgccggacgcccagccggctgtcggggctgagcgcagctggggccctgcccagcgct
ggtggccccgggctgagctgcgagctgcaggactgtcccttctgtgccagcctcctggac
gaccccgagttcgccctcagcgactccgacagcaacggcgactccgacagcaacggcgtc
tacgagttcacgcaggacctgcgccacggcgaccaccgcgaccagctccagcagcagcgc
ggcaggaggaggaggaagaagaagaaggccaaggagaggaacaaggtggtgaagctctgg
aaggcgttcggcaccaaactcaagaggatcgtggagagcaagtacttcaaccgcgggatc
atgatcgccatcctcatcaacaccctcagcatgggcatcgagtaccacgagcagccagac
gagctgaccaacgccctggagatcagcaacatcgtcttcaccagcatgtttgccctggag
atgctcctgaagctcctggcctttggcatctttggctacatcaagaacccctacaacatc
tttgatgggatcatcgtggtcatcagtgtctgggagatcattgggcagtcggacgggggc
ctgtccgtgctcaggacgttccggctgctccgcgtgctgaagctcgtgcgcttcatgccc
gccctgcgccgccagctcgtggtgctcatgaagaccatggacaacgtggccaccttctgc
atgctgctcatgctcttcatcttcatcttcagcatccttggcatgcatctctttgggtgc
aagttcagcctgaaaaccgacacgggagacacggttccagacaggaagaattttgattcc
ttgctttgggccattgtgactgtgttccagatcctcacgcaggaggactggaacgtggtg
ctctacaacgggatggcctccacctcctcctgggccgccctctacttcgtggccctgatg
acctttggcaattacgtgctcttcaacctcctggtggccatcctggtggaaggattccag
gcagagggagatgccaacaggtcagacacagatgaggacaagacatctgccaacttcgag
gacgagtttgagaagctgaaagacctcagagcaacagagatgaagatgtactcgctggct
gtcacccccaacgggcacctggagggcaggggggccatgcccccgcccatcatcctgcgc
acggccgccaccccgatgcccaccccaaagtgctccccacacctggactccctgcacgcc
ctcggcgactcgaggagaggcagcaacgcctcgctggaccccacgggctacgaccagaaa
tccttgtccagcctccgcagctccccctgcgccaactgggccaccagcagcacctggggc
agccgccgctccagctggaacagcctgggccgggcgccgagcctcaagaagaagaaccag
tcgggagagcgggaatcgctgctctccggagagggcaagggcagcacggacgacgactcg
gacgacgccaagtccggctcgcccagccggctctcgccgccgcgccgggccgagtccctg
gatcgccgcggctcccaggagctgctgcccgagctgctgagggtgccctccgtgcgccag
ctcgggcccggccccgccgccctgctgcccgccgagttccgcggctgcaacggcaagatg
ggcgccgagctcttcctcagggtggacgggcacaaggaggacgcgctggactacgaggat
gacggggaggacagttattgctaccggatccgcaaagccctggagccctacaaaccccag
tggtgcaagactcacgagaactggtccctctacttgttctccccacagaacaggttccga
gtgacgtgccagaaggtcattgcccacaaaatgtttgaccacgtggttctggtcttcatc
ttcctcaactgcatcaccatagctctggagagaccagacatcgaccccctgagcacggag
aggatattcctcagtgtctctaattacatcttcactgccatcttcgtggttgaaatgatg
gttaaggtggtagctcttggctttttctctggggagaacacgtacctgcagagcagctgg
aacgtcctggatggggtgctggtctttgtgtccatcattgacatcattgtgtccatggca
tcagcaggaggagccaaaatcctgggagtccttcgtgtgctgaggcttctgcggaccctg
agacctctccgagtcatcagcagagccccaggtctgaagctggtggtggaaaccttgatc
tcctccttgaggcctattgggaatattgttctcatctgctgtgctttcttcatcatcttt
gggattttaggggtccagctttttaaaggcaagttctactactgtgatggccctgatgtc
aaaaacatcaccacgaaggctgactgcaccaacgctcactacaaatgggtccggaggaag
tacaactttgacaatttggggcaggccctgatgtccctgtttgtcctctcctccaaggac
ggctgggtgaacatcatgtacgacgggctggatgccgtgggcattgaccaacagcccatc
cagaaccacaacccttggatgctgctctacttcatctccttcctgctcatcgtcagcttc
ttcgtgctcaacatgttcgtgggggtggtggtggagaacttccacaagtgccggcagcac
caggaggcggaggaggcgcggcgccgggaggagaagcggctgcggcgcctggagaaaaag
cgcaggagtaaggagatgtacctgtctgaggcccagcgcaggccctactacgccgactac
tcgccggccaggaggtacatccacagcctgtgcaccagccactacctggacctcttcatc
accttcatcatcggcgtcaacgtcatcaccatgtccatggagcactacaaccagcccaag
tccctggatgaagccctcaagtactgcaactacgtgttcaccatcgtctttgtgttcgag
gcactgctcaagctggtggcctttggtttccggaggttttttaaggacaggtggaaccag
ctggacttggccatagtcctgctgtccattgtggggatcactctggaggagatcgagatg
aacgctgccctgcccatcaaccccaccatcatccgcatcatgagggtgctcaggatagcc
agagtgctgaaactgctgaaaatggccacgggcatgagagctctgctggacacggtggtg
caagccctgccccaggtagggaaccttggcctactttttatgctcctgttttttatctat
gctgccctgggagtggaattgtttggcaagctggattgcagtgaggagaatccctgtgag
ggcctgagccgccacgccaccttcaccaacttcggcatggccttcctcaccctcttcagg
gtgtccacgggggacaactggaacggcatcatgaaggacacgctgcgggagtgcacgcgg
gaggacaagcactgcctcagctacctgcccgtcatctcgcccgtctacttcgtcaccttc
gtcctcatcgcccagttcgtgctggtcaacgtggtggtggcagtgctgatgaagcacctg
gaggagagcaacaaggaggccaaggaggacgctgagatggacgccgagatcgagctggag
atgtccagaggaaccggcgggagcaggagcggggccgtggccggggagagccgggcgctg
cacgggaacctggagcagcccaaggagaagcaccaaggcctgggcagtgcggcctcgctg
agggcccaggactcccagaacctgctgacagtgaggaagatctcggtgtcccggatgcat
tccctgcccaacgacagctacatgttccggcccgtggccccagccacggcccccctgccc
ctgcacgaggtggagatggaaacctacccctgcaaagcccaaagagggtccatcagctcc
acgcgctcgcagcccgtggggggcagctcctcgctgagggtgcccgcggaggacgggcgg
caccgctggaaggggctggtcccccatggcagcccccgctcccctgctctcagcaagctg
ctctgcagacaggtgaggggccaccagcacacagaggaggccgttcggacagactcggta
gacggacagactccagagcacaaagacagccagcaagcagagcctggagagccccaacca
tcagcaaagcagccccagagcaccctcaccgccagccctctccattccccgctcccagcc
acccctccacgctctcccccatcctccccacaccgggccctgggccccctggcacggaag
cacacgtgtggccagcacggcgttcccagccggccacccagccccagcagcccccccggc
cccgagggctgccaggccgagccctcagacctggctgacgaggaggttcggcacatcaac
agctcggccaaagactgggcagaggagcactcggaccccggcagccgctccacctcgccc
ttcacgtccccggccccgtcccctgtgcccctcaagaactgcagcacaagcagcctctcc
cgcagggagaaggacttgaagaagttctacagcaccgacaccaagggcttcctcagcaag
cccagctgggccgatgagcagcggcggcattccatcgagatctgcccctccggcggcgcc
cccgagcccgccgaggacaagcagcggccccctggccacatccagccggaggccgactac
atccacggagcccggaggaagaagaagatgagcccgccctgcatttctatagatcctccc
atggaggacgagggagcggcggccccgcgcaccaaaccctccgagaacaccctgctgcgg
aggagaaccccgtcctgcgagttcccggcctaccgagaatccctggagctcccggagagc
cgagggggggagcacctcagcatccccaacttctccttcgagcagctggacggcggcggc
tccttgagcagcctctcggagctgcgggacagcgggcagcccacgccggcctccctggac
tcgcggccggacgctgagccgaggaaacaggagcacttaaaaactcagcggggcaacaac
ggcaaagaggggggcaaagagctgctgggcactgccaagagccccccgcgcaagcaggac
ttgggccccgtgactgttgccacagaagaaggcacggatgagccagtatag
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