Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453978
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Entry
135453978 CDS
T09958
Symbol
BRAT1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135453978 (BRAT1)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
135453978 (BRAT1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_EZ
RTP1_C1
UTP20_N
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
135453978
NCBI-ProteinID:
XP_064581659
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Position
14:12187558..12196275
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AA seq
854 aa
AA seq
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MCDPQSRFVARARRRFAMTRECAVLLPGVCAALADPRQPGLDDTCLEKLLDWFRSLTWFD
PTVELVQGNPCLTELLSSVLALPDASPGILSFTLQLAGILASSESRFQHLQQEKLLGRLF
GPEGPRGGAAWEDASVRSAWLKGVHSMLHHLPALHCLCSTGGMDVIFTLQGDPSLFVASA
ASQLLVHLLTFSLESETSKALSAKDCDWPGCAQMIVEHIKESLQSSSAPHVEQSLKLLSS
LFGSCFGSCYAAWTEVLWLDIAKQIESFLLEETVQAQPLLANLLLNVARSPAFCGTEGSF
WALVTSALEHLTPVQAGPLAVGLLKLCKCPQDVRIQALTVLLQPMDCILRAASQPLECAG
LLDESVSDPATVESLLSSKTSCAGLLCQTLTHLEKLLSLKHLRVDLPCVSLLHSLMTILQ
FCNGFLSPTSPLGSTISRNLINCFRVQKSALDVLAALSEKKECDTLIGNLFDVLLAYLQS
PNTSPTVLKKTFQATSKWLVHLQELSSSNSQGPQTEKILEDVLVVLQKRLCSPCWEVRDS
SLEFLTSMVKCLRDQKEFRQCLLSSEVLRLTENLLEDPESYVRASAVTAVGHLAPIACFA
PDSPVTGSQYNRESILAKLQEILSTDSEGFPRRAVISIFTKWLREGCTGQLEDTELFVSR
VIQTVERDLDWEVRLGGLELVEVFCSQTICQLSQCPYAPVTSAVPSSTPQKELLQVFCRA
KLFGFLFGSLCDCDKPVGQRACDVLVGLRGHFYPMSTLENPQEIEDSPAGRGIAWLQRTL
RQGSLAQNFPMDGDVGVDFQDPESMMLALGAIDLLELHDELNKSSDHVEESPQSLLQDIL
AAVGTIEDNEVDCY
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgacccccagtcccgcttcgtggcccgggcccgccgccgcttcgccatgacccgc
gagtgcgccgtgctgctgcccggggtctgcgccgccctggccgacccgcggcagcccggc
ctcgacgacacctgcctggagaaactgctggactggttccgcagcctgacgtggttcgac
cccactgtggagctggtgcagggcaacccgtgtctgacagagctcctcagctccgtgctg
gccctgcccgatgccagccccggcatcctgtccttcaccctgcagctggccgggatcctc
gcctcgtccgaaagccgcttccagcacctgcagcaggagaagctgctggggaggctcttt
ggcccggaggggccgcggggcggcgcggcgtgggaggacgcgtcggtgcgcagcgcctgg
ctgaagggtgtgcacagcatgctgcaccacctgcctgccctgcactgcctctgctccacg
ggaggcatggatgtgatcttcactctgcaaggggatcccagcctgtttgtggcttcagct
gccagccagctcctggtgcacttgctcaccttctccctggagtctgaaacatccaaagct
ctcagtgccaaggactgtgactggccaggctgtgcccagatgattgtagagcacatcaaa
gagtcccttcagtccagctctgcccctcacgttgagcagtccctgaagctgctgagcagt
ttgtttggcagttgttttggcagttgctatgctgcatggactgaagtcctttggttggac
atagcaaagcaaatagaatcctttctgctggaggagactgttcaagcccagcccctgctg
gccaatcttctgctgaacgtggcacgatcccctgcattttgtggcactgaaggcagcttt
tgggcattggtaacttctgctctggaacacttaaccccagtacaagcaggtcctctggca
gtgggacttctgaagctctgcaaatgcccacaagatgtcaggattcaggcactgactgtt
ctgcttcagccaatggactgtattttgagagcagcctcccagcctctggaatgtgcaggt
ttgctggatgagtctgtcagtgatcctgccactgttgaaagtcttctgtcctccaagaca
tcctgtgctggtctcctgtgtcagaccctcacccacctggagaagctgctgtctctgaaa
catttaagagtggatttaccctgtgtgtctttgctgcactctctcatgacaatattacaa
ttctgcaatggcttcctgagcccaacttctcctctgggaagcacaatcagccggaatctg
atcaactgcttcagagtgcaaaagtcagcccttgatgtccttgcagcactctcagagaaa
aaagagtgtgacactctcataggaaatctatttgatgtccttctggcatatctgcagagt
ccaaacaccagccctactgttctaaagaaaacctttcaagctacatccaagtggttggtg
cacttgcaggaactgtcctcctccaacagccaggggccacaaactgagaagattttggaa
gatgtgctggtggtgctgcagaaacgtttgtgcagtccttgctgggaagtcagagattct
tccctggagttcctcacttccatggttaagtgcttgagagaccagaaggagttcaggcag
tgtctcctgtcctctgaggtgctgaggctgacagaaaacctgctggaggacccagagagc
tacgtgcgagcgagcgccgtgactgccgtgggacacctggcccccattgcttgctttgct
ccagactcacctgtcacaggcagtcagtataacagagagagcatcctagcaaagcttcag
gaaatcttgtcaacagactcagagggctttcctaggagggctgtgatcagcatcttcacc
aagtggctgagggaaggctgcacaggtcagctggaagatacagagctctttgtctctaga
gtcatccagactgtggagcgtgacttagactgggaagtcagactcggtggtttggagctg
gtggaagttttctgtagccagaccatttgccagctctcccagtgtccctatgctcctgtc
acctctgcagtccccagttccacccctcagaaggagctgctgcaggtgttctgtcgagca
aagctgtttgggtttttgtttggctctttgtgtgactgtgacaaacccgtggggcagaga
gcctgtgatgtgctggttggcctgagaggccatttctaccccatgagtactttggagaat
ccacaggagattgaagattcacctgcaggacgtggcattgcctggctacagaggacactg
agacagggttctctggctcagaacttccccatggatggtgatgttggggtggatttccaa
gatccagagagcatgatgttagctttgggtgcaatagacttgctggagctgcatgatgag
ctaaataaaagtagtgaccatgtggaggaaagccctcagtccctcttacaggacatcctt
gctgctgtggggaccatagaggataatgaagttgactgttattga
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