Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454263
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Entry
135454263 CDS
T09958
Symbol
TRAF7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135454263 (TRAF7)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135454263 (TRAF7)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135454263 (TRAF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
WDR55
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
NBCH_WD40
WD40_like
Beta-prop_IP5PC_F
zf-RING_UBOX
Beta-prop_SPT8
Beta-prop_DCAF4
zf-C3HC4
zf-TRAF
zf-C3HC4_2
Beta-prop_EIPR1
zf-C3HC4_4
Beta-prop_IFT140_2nd
Sina_ZnF
Beta-prop_Nup120_160
zf-C3HC4_3
WD40_MABP1-WDR62_1st
zf-RING_5
PKcGMP_CC
DUF641
MIOS_WD40
DUF1664
Filament
DUF16
KxDL
DUF4164
Motif
Other DBs
NCBI-GeneID:
135454263
NCBI-ProteinID:
XP_064582297
LinkDB
All DBs
Position
14:15411665..15440236
Genome browser
AA seq
670 aa
AA seq
DB search
MSSNKSARYNRFSSGTTNITTAENTNGTRMETTFGPAFSAVTTITKADGTNTFKQHRRTP
SSSSTLTYSPRDEDDGMPPISTPRRSDSAISVRSLHSESNMSLRSTFSLHEEEEEPEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCKYGCRPAASSKSPAFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCAFIGNQDTYETHLETCKFEGLKEFLQQTDDRFHE
MQVAMAQKDQEIAFLRSMLGKLSEKIDQLEKNLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT
IKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaacaagagcgctcgctacaatcgtttctccagtggcaccaccaacatcact
actgctgagaacactaacgggacaagaatggaaacaacttttggaccagccttctctgct
gtgaccaccatcacaaaggctgacgggaccaacactttcaagcagcaccgccggaccccg
tcctcctccagcaccctcacgtactccccacgggacgaggatgatggcatgcctcccatc
agcaccccgcgccgctccgactccgccatctccgtccgctccctgcactccgagtccaac
atgtccctgcgctccacgttctcgctccacgaggaagaggaggagccagagcccctggtg
tttgcagagcagccctctgtgaagctgtgctgccagctgtgctgcagtgtcttcaaggat
cccgtcatcacaacctgtgggcacacgttttgcaggagatgtgccttaacatctgagaag
tgccccgtggacaacgccaagctgacggtggtggtgaacaacatcgcggtggccgagcag
atcggggagctgttcatccactgcaagtacggctgccggcccgccgccagcagcaagagc
cctgccttcgaggtggacccccgaggctgccccttcaccatcaaactcagtgccaggaag
gatcatgagagcagctgtgattacaggcccgtgcgctgccccaacaaccccagctgccct
cccctcctcaaaatgaacctggaggctcacctgaaggagtgtgagcacatcaagtgtccc
cactccaaatacgggtgtgccttcatagggaaccaggacacctacgagacccacctggag
acgtgcaagttcgaggggctgaaggagttcctgcagcagacagacgatcgcttccacgag
atgcaggtggccatggcccagaaggaccaggagatcgccttcctgcgctccatgctgggc
aagctctcggagaaaatcgaccagctggagaagaacctggagctgaagtttgatgtgctg
gatgagaaccagagcaagctgagcgaggacctgatggaattccgcagggacgcctccatg
ctgaacgatgagctctcccacatcaatgctcggctcaacatgggcatccttggatcctat
gatcctcagcagatcttcaagtgcaaggggacctttgtgggccaccagggccccgtgtgg
tgtctgtgtgtgtactccataggagacttgctcttcagtggctcctcagacaaaaccatt
aaggtgtgggatacctgtaccacgtacaagtgccaaaagaccctggagggtcacgatgga
attgtgctggctctctgcatccaggggaacaagctgtacagtggctctgctgactgcacc
atcatcgtctgggatattcagaacctgcagaaggtgaacacgatccgagcacacgacaat
cctgtttgcactttggtctcctcacacaacatgctcttcagtggctccctcaaagccatc
aaggtgtgggatattgtgggaactgagctcaagctgaagaaggagctgacaggtctcaac
cactgggttcgagcgctggtggcttcccagaactacctgtacagtggatcctaccagacc
atcaagatctgggacatccggaacctggaatgtgtgcacgtgctgcagacgtcgggaggc
agcgtctactccatcgccgtgaccaaccaccacatcgtgtgtggcacctacgagaacctc
atccacgtgtgggacatcgagaccaaggagcaggtgcgcacactgaccgggcacgtgggc
acagtctacgccctcgccgtcatctccacgcccgatcaaaccaaagtcttcagcgcgtcc
tacgaccgctcgctcagggtgtggagcatggacaacatgatctgcacccagaccctgctg
cgccaccagggcagcgtcaccgccctggccgtgtcccgcggccgcctcttctccggcgct
gtggacagcactgtcaaggtctggacgtgctaa
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