Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454301
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Entry
135454301 CDS
T09958
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03420
Nucleotide excision repair
zle03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135454301 (ERCC4)
03460 Fanconi anemia pathway
135454301 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zle03032
]
135454301 (ERCC4)
03400 DNA repair and recombination proteins [BR:
zle03400
]
135454301 (ERCC4)
DNA replication proteins [BR:
zle03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
135454301 (ERCC4)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
135454301 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
135454301
NCBI-ProteinID:
XP_064582366
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All DBs
Position
14:complement(6856057..6871893)
Genome browser
AA seq
905 aa
AA seq
DB search
MAALLEHESQIFLELFHRDGLVVCARGLGIDRLLLRFLRLYCEPASLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCQVERVMKNLFVGKLY
LWPRFHIAVHSFLEKHKPEVVEIHVAMTPAMLAIQTAILDILNACLKELKRYNPALEVED
LSLENAIAKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQKGKGSGSEKRDVKKENEL
KRELVLESNPKWEALREVLKEIENENKNSDNLGGPGQVLICASDDRACAQLREYIITGAE
AFLTRLYNKTFGKDEKAGEVWIKDRKATKSKGNAKPDTGPQAKKAKLTASSKQNKQKKQQ
DRTLIQMIGKTEEEKREEVEVEDNKELSGSQESNTEETIPEDFDFSLPSDCSYGIFKDPL
TIIHPLQGCGDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYG
GSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDDTNLALLRDARPASVSADTRK
AGGQEQKGVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISD
LIGSLNNGRLYAQCVAMCRYYKRPVLLIEFDPNKPFSLIPRGSLQPEISSNDVTSKLTLL
ALHFPKLRILWCPSPHATAEVFEELKQNHPQPDAETAMAVTADSEILPESDKYNPGPQDF
LLKMPGVNAKNCRALMTHVKSIAELVTLSKDELAKILGNAANATQLFDFIHLTYAEALAK
GKSKK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccagatcttcctggagctcttccaccgcgacggg
ctcgtcgtgtgcgcccgcgggctcggcatcgaccgcctgctgctgcgcttcctgcgcctc
tactgcgagcccgccagcctggtgctcgtgctcaacaccagccccgccgaggaggagtat
tttattgatcagctgaggtcagatggagttgttcatctccctcgacgtgttaccaatgaa
attgcaaataatactcgatatgaattttatacacaaggaggagtcatctttgcaaccagt
cggatccttgtggtagatttccttactgacagaatccctgccaatctcattactggcatt
ttggtgtacaaagcacacagaatcattgagtcctgtcaggaagcgttcatcttgcgcctt
tatcgccagaagaacaagcaaggcttcattaaagcttttacagataatgcagttgcattt
aacactggcttttgtcaagtggaaagagtgatgaagaatctttttgttgggaagctttat
ctgtggccaagatttcacatagcagtgcactcgtttttagagaagcataaacctgaagtg
gtggaaatccacgtggccatgacccctgctatgcttgccatccagactgcaatcctggac
attctgaatgcatgtctgaaggaactgaaacgttacaacccagctcttgaagtagaagat
ctatctttagagaatgctattgctaaaccttttgacaagacaatccgccactatttagat
cctctctggcatcagctcggagctaagacaaagtctttggtgcaggatctgaagatccta
cgtactttgctactgtatctaacccagtatgattgtgtcactttccttaatctcctggag
tcactgaaagcaagtgaaaaagcttttggtgagaattcaggctggctgttccttgactcc
agtacttcaatgtttgtgaatgctcgcgctcgagtttatcgcattgcagatgagaaactg
aatcagaaaggcaaaggctcaggctctgaaaaacgtgatgtaaagaaggaaaatgaactg
aaaagggaattggttctagaaagtaacccaaaatgggaagctttgagagaagtactgaaa
gagattgaaaatgagaataagaacagtgacaaccttggcggtccagggcaagtgctcatt
tgtgccagtgatgaccgagcctgtgcacagctcagggagtatattattactggagcagaa
gcttttctaacaagactttataacaaaaccttcgggaaggacgagaaagctggagaagtg
tggattaaggacagaaaagccacgaagtccaaaggaaatgccaaaccagacacagggcct
caagccaaaaaggccaaactgacggcttcttcaaaacaaaataaacagaagaagcagcaa
gaccggactctaatccaaatgatagggaaaactgaggaggaaaagagagaagaggtcgag
gtggaagacaacaaagaattaagtggtagccaagaaagcaacactgaagagaccattcct
gaagattttgatttcagcttgccctcggattgttcctatgggattttcaaggacccactg
acaattatccacccgctgcagggctgtggggatccctacgcgctcactcgggtgctgcac
gaagtagaacccagatatgttgtgctgtatgatgcagaactcacttttgttcggcagctg
gaaatctacaaggcaagcaggcctgggaagcctttgagagtttatttcctcatatatggg
ggctccacagaagagcagcgctacctcacagctctgaggaaagagaaggaggccttcgaa
aaactcattcgagagaaggccagcatggttgttcctgaagaaagagaaggaagagatgat
acaaacttagctctcctcagagacgccagacctgcctctgtctctgctgacacacgcaaa
gcaggtggacaggaacagaagggtgtccagcaaaccataatcgtggatatgcgggaattc
cgtagcgagcttccatccctgatccatcgccgtggcatcgacatcgagcccgtgacgttg
gaagttggggattacattctaacccctgacatctgcgtggagcgcaagagcatcagcgat
ctgatcggctccctgaacaacggccggctgtacgcgcagtgcgtggccatgtgccgctac
tacaagcggccagtgctcctcattgagtttgatcctaacaaacccttctccttgatccca
cgaggctctttacagccagaaatttccagcaatgatgttacttctaaactgacccttctc
gcactgcacttcccaaagttacgaatcctgtggtgtccctctccccacgctactgctgaa
gtctttgaagagttgaaacaaaaccatccccaacccgacgcagaaacagcgatggccgtc
accgcagactccgaaattctccccgagtcagacaagtacaaccctgggcctcaggacttc
ctgctgaaaatgccaggggttaatgcaaagaactgccgtgccttaatgacccacgttaaa
agcattgcagagctggtgacgctgtccaaggacgagctggccaagattttgggtaatgct
gccaatgccacacaactctttgactttattcacctgacctatgcagaggcactagccaaa
ggaaaaagcaaaaaatga
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