Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454332
Help
Entry
135454332 CDS
T09958
Symbol
APP
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135454332 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
zle00535
]
135454332 (APP)
00536 Glycosaminoglycan binding proteins [BR:
zle00536
]
135454332 (APP)
Peptidases and inhibitors [BR:
zle01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
135454332 (APP)
Proteoglycans [BR:
zle00535
]
Cell surface proteoglycans
Others
135454332 (APP)
Glycosaminoglycan binding proteins [BR:
zle00536
]
Heparan sulfate / Heparin
Others
135454332 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Gluconate_2-dh3
Prominin
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
135454332
NCBI-ProteinID:
XP_064582400
LinkDB
All DBs
Position
1:102053619..102253074
Genome browser
AA seq
750 aa
AA seq
DB search
MLPHLAVLLLAAGAARALEVPADGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPATIQNWCKRGWKQCNGHPHIVVPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKESCSEKSMNLHDYGMLLPCGIDKFR
GVEFVCCPLAEESDNLDSADAEDDDSDVWWGGADADYADGSDDKAVEEQAEEDEELTVVE
DEDADDDDDDGDEIEETGEEYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCR
AMISRWYFDLAEGKCAPFFYGGCGGNRNNFDSEEYCMAVCGSIIPTTAASTPDAVDKYLE
TPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKSLPKADKKAVIQHFQEKVE
SLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRA
EQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSFLYNVPAVAEEIQD
EVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVDGDFSLDDLQP
WHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNVKTEEISEVKMDAEFRHDSG
YEVHHQKLVFFAEDVGSNKGAVIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDA
AVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccacttagccgtcctgctgctggccgccggcgccgcccgggctctagaggtg
cctgctgatggaaatgcagggctgctggcagaacctcagattgccatgttctgtggcaaa
ctcaacatgcatatgaatgtgcagaatggaaagtgggaatcagacccttctggcaccaag
acctgcattgggacaaaagaaggaattcttcagtactgccaggaggtgtaccctgaattg
caaatcaccaatgtcgtggaagccaaccagccagctacaatacagaactggtgcaagagg
ggatggaagcagtgcaatggtcacccccatatcgtggttccctacaggtgtctggtgggc
gagtttgtgagtgacgctcttctggtgccagacaagtgcaagttccttcaccaggaaaga
atggatgtgtgtgaaactcacctgcattggcatactgttgctaaagagtcctgtagtgag
aagagcatgaatctgcacgactatggcatgctgctgccctgtggaattgacaagtttcgt
ggtgtggagtttgtctgctgccccttagcagaggaaagcgacaatcttgattcagctgat
gctgaagatgatgattcagatgtctggtggggaggtgcagatgcagactatgcagatgga
agcgatgataaggcagtagaagaacaagcagaggaagatgaggagctaactgttgtggaa
gatgaagatgctgatgacgatgatgatgatggtgatgaaattgaagagacaggagaagag
tatgaggaggcaactgaaagaaccaccagtattgcaaccactaccaccacaactacagag
tctgtggaagaggttgtcagagaggtgtgctctgagcaagcggagaccgggccgtgccgc
gcgatgatctcccgctggtactttgacctggccgaaggaaagtgcgcgcccttcttttac
ggcggctgcggcgggaaccggaacaactttgactcggaggaatactgcatggcggtctgt
ggcagcatcatccctaccacagccgctagcactcctgatgctgttgacaaatacttggag
acacctggagatgagaatgaacatgcccatttccagaaggccaaggagaggcttgaagct
aagcatcgcgaaagaatgtctcaggtcatgagggagtgggaagaggcagaacgccaagca
aagagcttgccaaaggccgacaagaaagctgtcatccagcatttccaggagaaagtggaa
tcactggagcaggaagcagcaaatgaaagacagcagctcgtggagactcacatggcacgg
gtggaagccatgctgaacgaccgccggcgcattgctctggagaactacatcacagccctg
cagactgtcccgcccaggcctcgtcatgtattcaacatgctgaagaagtatgtgcgtgct
gagcagaaggacagacagcacactctcaaacacttcgaacacgtccgcatggtggaccca
aagaaagctgcccaaatcagatctcaggttatgacacatctacgtgtgatatatgaacgc
atgaaccagtctctctccttcctctacaacgtgcctgctgtggcagaggagatccaagat
gaagttgatgaattacttcagaaagaacaaaactactctgatgatgttttggccaatatg
atcagtgaacccagaatcagctacggaaatgatgctctcatgccttcattgacggaaaca
aagaccacagttgagctgcttccagtggatggagacttcagcctagatgaccttcagcca
tggcatccctttggagttgactctgttccagccaatactgaaaatgaagttgaacccgtt
gatgcccgcccagctgcagacagaggactcaccacacgaccaggttctgggttgaccaac
gttaagacagaagagatctctgaggtgaagatggatgcggagttccggcatgactcagga
tacgaagttcatcatcaaaagctggtgttctttgctgaagatgtgggctcaaataaaggt
gctgtcattggactaatggtgggaggtgttgtcatagcaacagtgattgtcattactttg
gtgatgctgaagaagaagcagtacacatctattcatcatggggttgtggaggttgatgct
gcagtgacaccagaggagcgccacctttccaagatgcagcagaatggctacgaaaatccc
acatacaagttctttgaacagatgcagaactag
DBGET
integrated database retrieval system
