Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454354
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Entry
135454354 CDS
T09958
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135454354 (VPS35L)
Membrane trafficking [BR:
zle04131
]
Protein recycling
Others
Retriever complex
135454354 (VPS35L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
135454354
NCBI-ProteinID:
XP_064582438
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All DBs
Position
14:8621612..8663557
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AA seq
963 aa
AA seq
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MAAFPWHARSRNYVSESEVCKLESVPLDFGDYHPLKPITVTESKTKKMNRKGSTSSTSSS
SSSSVMDPLSSVLDGTDPLSLFAAAADPGAAAPPTEGARRKRDKDESSAVGSDFEPWSSK
RGEILARYTTTEKLSINLYMGSEKGKTTTTGSAVSEKVRTRLEELDDLEEGSQKELLNLT
QQDYMNRIEELNQSLKDAWSSDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLITDILDT
FGKLVYERILSMCVDNRVSLPDNFSPESVNDTAKETCLNWFFKIASIRELIPRFYVEAAI
LKCNKFLSKTGISECLPRLTSMIRGIGDPLVAVYARAYLCRVGMEVAPQLKESLNKNFFD
FLLTFKQIHGDTVQNQLVVQCVEIPLYLTLYSPAIDWILQCIAYHAPDVLLTEMMERCKK
LGNNALLLNSVMSAFRAEFIAARSMDFIGMIKECDESGFPKHLLFRSLGLNLALADPPEN
DRLQILNEAWKVITKLKNPQDYINCAEVWVEYTCRHFTKREVNTVLADVIKHMTPDRAFE
DAYPQLQSIIQKVITYIYDFALLFSVEKFLPFLDMFQKESVRVEVCKCIMESFIKHQQEP
TKDPVILNALLHVCKTMHDSVNALTLEDEKRMLAALINGFIKMVSFGRDFEQQLSFYVEA
RSMFCNLEPVLVQLIHSVNQLAMETRRVMKGNHSRKTAAFVRACVAFCFITIPSLSSIFT
RLNLYLHSGQVALANQCLSQADAFFKAAVSLVPEVPKMISVDGKMRPSDAFLLEFLCNFF
STLLVVPDHPEQGVLFLVRGLLNVIQDYTWEDNSDDKVRIYTNVLHLLSAMTQEAFIYHV
DKVDSNDALYGGDSKFLAEINKLSETVVSQILDHLKTLGKEETLKRQSQLALYFFNTILA
HGDLRNNRLNQLSVNLWNLAQKHGFADTKTMVKTLEYIKRKSKQPEMSHFTDLALRLPLQ
SRT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgttcccctggcatgcaagatcaaggaactatgtgtcagaatctgaagtgtgc
aagctggaatctgtacccttggattttggtgattaccatccactgaagcccattacagtt
actgaatccaagacaaagaagatgaacaggaagggcagcacctcttctacctcctcctct
tcctccagttccgtgatggaccctctgagcagcgtgctggatggcaccgatcccttgtca
ctgtttgcagcagctgcagatcctggggctgctgctccccccacggaaggtgcacgaagg
aaacgggacaaagacgagagctcagcagtggggagtgactttgagccatggtcaagcaaa
cgtggtgaaatccttgctagatacacaacaacagagaagctttctattaatctgtacatg
gggtctgaaaaaggaaaaaccaccactactggttcagcagtctctgaaaaagtgaggaca
aggttagaagagctggatgatctggaagagggatcgcagaaggagctgttgaatttgact
caacaggattacatgaacagaattgaagaactgaaccagtctctaaaggatgcatggtcc
tctgatcagaaagtaaaagctctgaaaatagtcatccagtgttctaagcttctttcagac
acaacagtaatccagttttatccaagcaaatttgttttaattacagatatccttgatact
tttggaaaattggtgtatgaaagaattctgtcaatgtgtgtggataaccgagtctctctg
ccagataacttttctccagagagtgttaacgatacagctaaagaaacttgcttaaactgg
tttttcaagattgcttcaatcagagaactcattcccagattttatgtggaagcagcaata
ctgaagtgcaataagttcctctccaaaacgggcatttcagagtgtctgccacggttaaca
tccatgattagaggaattggagacccactggttgcagtctatgccagagcatacctgtgc
agggttgggatggaagtggcaccacaactcaaagaaagcctgaataaaaacttttttgac
ttcctcctaacatttaaacaaatccatggggatacagttcagaaccagctggtggtgcag
tgtgtggagatccctttgtatctgaccctgtattctcctgctatagactggattttacag
tgtattgcctaccatgctccagatgttctgcttactgagatgatggagagatgcaagaag
ttggggaacaatgctttgctgttgaattcagtgatgtcggcgttcagagcagagtttatt
gctgcgagatcaatggacttcattggcatgattaaagagtgtgatgagtctgggttccca
aagcatctcctctttcgctccctgggattaaacttggcattggctgatcctcctgaaaat
gatcgccttcaaatactaaacgaagcctggaaggttataacaaagctgaagaacccacag
gattatatcaactgtgctgaagtgtgggtggagtatacctgcagacattttacgaaacga
gaggtcaatacagttctggctgatgttatcaaacacatgactcctgatagagcatttgag
gatgcttacccacagctgcagtcaattattcagaaagttattacctatatctatgacttt
gctctgcttttttcagtggagaaattcttgccatttctggatatgttccagaaggaaagt
gtgagagtggaggtttgcaagtgcattatggaatcttttattaagcaccagcaggagccg
acgaaggaccccgtcatcctcaatgccctgctgcacgtctgtaagacaatgcacgactct
gtgaatgcactaacacttgaggatgagaaaagaatgttagcagctctgataaatggattc
ataaaaatggtttcctttggccgtgactttgaacaacagctgagtttctatgttgaagcc
aggtcaatgttttgcaatctggagcctgttctagtccagctgattcattctgtgaaccag
ctagcaatggaaaccagaagggtgatgaaaggaaatcattccaggaagactgctgcattt
gtcagggcttgtgttgccttctgcttcatcacaattccctctctgagcagtatcttcaca
cgtctcaatctgtatctacactctggacaggttgctctggcaaatcagtgcctttcacaa
gctgatgcttttttcaaagctgcagtgagccttgttcctgaagtgccaaaaatgatcagt
gtagatggaaagatgcgaccttctgatgccttcctcctggaattcctgtgtaatttcttt
tccacattattagttgtcccggaccatccagaacaaggagtgttgttccttgtgcgagga
ttactgaatgtgatccaggattacacttgggaggataacagtgatgacaaagtcaggatt
tataccaatgttttgcatctgctgtctgcaatgactcaagaagcatttatctaccatgta
gataaagttgattccaatgatgctctctatggtggagactccaagttcctggctgaaatt
aataaactgagtgagacagtggtgtcacagatcctggatcacctgaaaaccctgggaaag
gaggagaccctgaagaggcagagccagctggctctctatttctttaacaccatcctggct
catggggacctacggaacaacagactgaaccagctctcagtcaatctctggaatcttgct
cagaagcatggctttgctgacaccaagactatggtgaaaaccctggaatacatcaagagg
aagagcaaacaacctgaaatgagtcatttcacagacctggccctccggcttcctctgcag
tccaggacctga
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