Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454438
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Entry
135454438 CDS
T09958
Symbol
HNF1A
Name
(RefSeq) LOW QUALITY PROTEIN: hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135454438 (HNF1A)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
135454438 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
KPBB_C
YebO
Motif
Other DBs
NCBI-GeneID:
135454438
NCBI-ProteinID:
XP_064582641
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All DBs
Position
15:10650672..10664564
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AA seq
670 aa
AA seq
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MVSKLTHLQVELLEALLESGLTKETLIKALSEAEPYGLQSESQRAINALQSEKGEPCPDI
PNLPNGMADSRASEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQRE
YGNNCSCLRVIKDSAYPYSXLFSRKKFPFPFVLAEFTHAGQGILTDEPMGDDLPTKKGRR
NRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAECIQRGVSPSQAQGLGSNLVTE
VRVYNWFANRRKEEAFRHKLAMDTFSGPQPAPGPPLTPHSSSSLQPPPALSPSKVHGVRY
NQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGLEPSQNLLSTDTKLVSAPGGTLPPV
STLTALHSLEQSPHTLSQQTQNLIMASLPGVMAIGAGEAPSLAPAFTNTGASTLVIGLAS
TQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPLMQQVQSHINQSPFMATMAQIQNPH
ALYGPKSEVTQYTHAGLLPQTMVITDTANLSALTNLTPTKQAFTPDSETHTESGMHTPVS
QAPTIHLQNQDTTIQHLQPGPRLTSSPAVSSSSLVLYQSSDSTSSHSQLLPSTHNAIETF
ISTQMASSSQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggtctccaagctgacccatctccaagtggagctgctggaagcgctgctggagtcgggg
ctgaccaaggagaccttgatcaaggctctgagcgaagcggagccctacgggctgcagagc
gagagccagcgcgccatcaatgccctgcagagcgagaaaggggagccctgccccgacatc
cccaacctccccaacggcatggccgactccagggcgtcagaagatgaaacctccgatgat
ggagaggagtttacccctccgataatgaaggagctggaaaacttgagccctgaggaggct
gctcaccagaaggctgtggtggaaagactattacaagaggatccctggcgagtagcaaag
atggtgaagtcttacctccagcagcacaacatccctcagcgtgaggtggtggacaccaca
ggtctgaaccaatcccacctctcccaacacctcaacaagggcactcccatgaagacccaa
aaaagggcagccctgtacacctggtacgtccggaagcagcgagaggtggcccagcgtgag
tatggcaacaactgctcctgtctcagggtcataaaggattctgcttatccttactcctga
ttgttttcaaggaaaaaattcccttttccctttgtgcttgcagaattcacacatgctggc
cagggtatcctgacagatgagcccatgggagatgacctgcccaccaagaaaggaaggaga
aaccgctttaagtggggtccagcctcacaacagatcctgttccaagcctatgagaggcag
aaaaaccccagcaaagaagagagggaggcactggtggaagagtgcaacagggcagagtgt
attcagagaggtgtttccccatctcaggcccagggactgggctcaaacctggtgacagag
gtcagagtttacaactggtttgccaaccgcaggaaggaggaggctttccggcacaagctg
gccatggacaccttcagcggcccgcagccggccccgggcccgcccctcaccccgcacagc
tcctcctccctgcagcccccgcccgcgctctcacccagcaaagtccacggagtgaggtac
aaccagcagccagccagtgaggcagagtcctccagcagcaaccaccacgggaacagctcc
atggtgaccacccagaccatcctgcatcaggtgtctccccctgggctggagcccagccag
aacctgctgagcacagacactaagctggtctcagctcctggaggaaccctccctcctgtc
agcaccctgactgccctgcacagcctggagcaaagcccccacacgctgagccagcagacc
cagaacctgatcatggcctcgctgccgggggtgatggccatcggggcaggcgaggcgccg
tccctggcgcccgccttcaccaacaccggagcctccacgctggtgatcggcctggcctca
acccagccccagagtgttcctgtgataaacagcatggggagcagcctcactaccctgcag
cctgttcagttctcccagcaactgcacccatcctaccagcagcccctcatgcagcaggtg
cagagccacatcaaccagagccccttcatggccaccatggctcagatccagaacccgcac
gctctctatggccccaaatctgaagtgactcaatacacacacgcaggcctcttaccacaa
accatggtgataacagacacagccaatctcagtgccctgaccaacctgacaccaactaaa
caggcattcacacctgactcagagacccacaccgagtctgggatgcacacaccagtgtca
caggcaccaacaatccatctacagaaccaagacacaacaatccagcaccttcagccaggc
ccacgcctcacctcgagccctgctgtgtcctccagcagcctggtgctgtaccaaagctct
gactccaccagcagccacagccagctgctgccatccactcacaacgccattgagaccttc
atctccacacagatggcatcttcctcccagtaa
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