Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454440
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Entry
135454440 CDS
T09958
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03272
Virion - Hepatitis viruses
zle04145
Phagosome
zle04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
135454440 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135454440 (SCARB1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
135454440 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135454440 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135454440 (SCARB1)
Membrane trafficking [BR:
zle04131
]
Endocytosis
Phagocytosis
Scavenger receptors
135454440 (SCARB1)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135454440 (SCARB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
135454440
NCBI-ProteinID:
XP_064582645
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Position
15:1607785..1627470
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AA seq
501 aa
AA seq
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MAVAHRRLSVGLGLAGLACALLGGCLLLLGPLIVRQQVIKNVRIDPSSISFQMWKDIPVP
FYLSVHFFEVLNPKQVLRGEKPVLSQRGPYVYREYRVKTNITFHDNDTVSYLEYRQLFFQ
PHLSNGTEDEYIVVPNIMLMGAAVMVEKLPDLWKLLLSGALAGLKQEAFMNRTVGEIMWG
YEDPLIDAINAIVPGLLPFKGKFGLFMDFNNSNSGLFTVNTGMNNISQVHMVDSWNGLKK
VDYWRSSQCNMINGTAGEMWPPFMSPTSLQFYSPDACRSMTLVYEESGQFQGVPTFRFVA
PKTLFANGTDYPPNEGFCPCMQSGIQNVSTCRLNAPMFISHPHFYNADPSLVDAVEGLHP
SKEQHGLFLDVHPMTGIPMNCSIKLQLNLYIKHVSGIIQTGQIKPVVLPLLWFAESGSIE
GSVLKQFYTNLVLLPSVLEYLQYILLGLSVPLLVSAALLMARRKRGAAQKSPRAPARATP
SSETTPLLQDSDSPGQHGAQA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggcccaccgcaggctgtccgtggggctggggctggccgggctggcctgcgct
ctcctggggggctgcctgctgctcctggggccgctcatcgtccggcagcaggtcatcaag
aacgtcaggatcgaccccagcagcatctccttccagatgtggaaagacatccctgtccct
ttctacttgtcagtgcatttcttcgaggtgctgaaccccaagcaggtcctgcggggagag
aagccagtgctgagccagcgtgggccctacgtgtacagggagtacagggttaaaacaaat
atcacattccacgacaacgacactgtttcctacctggagtaccgacagcttttcttccag
ccacacctgtccaatggcacggaggacgagtacattgtggtgccaaacatcatgctgatg
ggagcagctgtgatggtggaaaaactgccagacctgtggaagcttttgctgagtggagcc
ctggctggcctgaagcaggaggcgttcatgaaccgcaccgtgggcgagatcatgtggggc
tacgaagaccccctgatagatgcaataaatgcaattgttcctggcctgctccctttcaag
gggaagtttggattattcatggatttcaacaactccaactcggggctgttcacagtcaac
acaggcatgaacaacatcagccaggttcacatggtggattcatggaatgggctcaagaag
gtggattactggaggagcagccagtgcaacatgatcaacgggacagcaggggagatgtgg
ccacccttcatgtccccaacctccctgcagttctacagccctgatgcctgcaggtccatg
acgctggtgtacgaggagtcggggcagttccagggtgtgcccacctttcgcttcgtggca
cccaaaaccctctttgccaacggcacagactacccacccaacgagggcttctgcccctgc
atgcagtctggcatccagaacgtcagcacctgcaggctcaatgcgccgatgttcatttcc
caccctcacttctacaacgccgacccgtccctggtggatgcagtggaaggcctgcacccc
agcaaggagcagcacgggcttttcctggatgtgcaccctatgacaggcatccccatgaac
tgctccatcaagctgcagctgaacctgtacataaaacacgtgtctggtatcattcaaaca
gggcagattaagccagtggtcctgccgctgctgtggtttgcagagagtggatccattgaa
ggctcagtgctgaagcagttttacaccaacctggtgctgctgccctcggtgctggagtac
ctgcagtacatcctccttggcctcagtgtccctctccttgtctcagcagctctcctcatg
gcaaggaggaagagaggagctgcccagaagagcccccgagcccccgccagagccaccccc
tcctctgagaccaccccgctgctgcaggacagcgacagccccgggcagcacggagcccag
gcatga
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