Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454578
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Entry
135454578 CDS
T09958
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135454578
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135454578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
NBCH_WD40
HIRA_B
Ribonuc_red_lgC
WDR90_beta-prop_4th
WD40_like
Motif
Other DBs
NCBI-GeneID:
135454578
NCBI-ProteinID:
XP_064582912
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All DBs
Position
15:7746217..7778564
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AA seq
1043 aa
AA seq
DB search
MKLLKPTWVNHNGEGRPGSRCRGPAGQQVPRAGRAGKPIFSVDIHPDGTKFATGGQGQDS
GKVVIWNMAPVLKEEDEKNENIPKMLCQMDNHLACVNCVRWSNNGVYLASGGDDKLIMVW
KRAAYIGPSTVFGSSSKLTNVEQWRCVSILRSHSGDVMDVAWSPHDAWLASCSVDNTVVI
WNAVKFPEILATLKGHSGLVKGLTWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFD
ECGGTTHVLRLSWSPDGHYLVSAHAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFN
PKIFKKKQKNGSSTKSSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWT
LNGLGILVCSMDGSVAFLDFSQDELGDPLSEEEKSNIHQSTYGKSLAIMTEAQLSTTIIE
NPEMLKYQQRQQQGDQKNSSIREGSGNSTAPKVASMVNGESLEDIRKNLLKKQVETRTAD
GRRRITPLCIAQLDTGDFSTAFFNSIPISGTLSGSMMSSQSNQQLMSLDSNAANSLNTSK
PSVEPTAASIKPTDDAANKDGVNATSASAAPSASSSSVLTTPSKIEPMKAFDSRFTERSK
ATSGTAVVTNTNQTVVDRLKDQNLIKDNKPKDILESSSDSEEKIPAVKPLSVPKRKLELE
GETVEKKKKGRPRKDSRLVPVTLTVQSPATLASEKDAACISAPALALKLPTPIPQKSFTL
QICSDPSMYLEVENEMTTVGGSKLSRLKCNREGKEWETVLTSRILAAAGSCEIVTVACEK
RTLSVFSACGRRLLPPIILNTPISTLHCTGSCIMALTTAATLSVWDVHKQTAIVRDESLQ
TIFSGSDATVSQILLTQHGIPVMSMSDGKAYCFNPSLSTWNLVSDKQDSLAQCADFRTSL
PSQEAMQCSGPLAVIQGRTSNSGRQAARLFSMPHLVQQETTLAYLENQIAAALILQSSHE
YHHWLLIYARYLVNEGFEYRLRELCKDLLGPVHYSAGSQWESTVMGLRKRELLKELLPVI
GQNLRFQRLFTEYQEQLDILRDK
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagccgacctgggtcaaccacaatggtgagggccggccgggcagcagg
tgccgcgggccggcggggcagcaggtgccgcgggccggccgggcaggaaagccaatattt
tcagtggacattcacccagatgggaccaagtttgcaacaggaggacaaggtcaggattct
ggcaaagttgtgatctggaatatggctcctgtcctgaaagaggaagatgaaaagaatgaa
aatatccccaagatgctttgtcagatggacaatcacttagcttgtgtgaactgcgtgcga
tggtcaaacaatggcgtttacttggcctcggggggagatgacaagctgattatggtgtgg
aaacgagcagcgtacattggacctagcactgtgtttggttctagtagcaaacttactaat
gttgagcaatggaggtgtgtgtcaattctcagaagccattcaggggatgtgatggatgta
gcatggtctccacacgatgcctggctggcatcctgtagtgttgataacactgttgtcatc
tggaacgctgtcaaattcccagaaattcttgccactttgaaggggcattctggcttggtg
aaagggctgacctgggatcctgttggaaaatacattgcctctcaggctgatgatcgaagt
ctgaaggtgtggcggaccctggactggcagctggaaaccagcatcacaaaaccctttgat
gagtgtggagggacaactcatgtgctgcgccttagctggtcacctgatggtcactatctt
gtttctgctcatgccatgaataattctggacccactgctcagatcattgagagggatgga
tggaaaaccaacatggattttgtagggcaccggaaggcagttaccgtagtgaaattcaat
ccaaaaatcttcaaaaagaaacaaaagaatgggagctccaccaagtcaagttgtccctac
tgctgttgtgctgttggtagcaaagatcgatctctgtctgtctggctcacgtgtctgaag
cgacctttagttgtcatccatgagctgtttgacaagtcaatcatggacatctcatggacc
cttaatggacttggtatcctggtgtgttccatggatggatcagtggcatttttggacttt
tcccaggatgaacttggggatccactcagtgaggaggaaaagagcaacattcaccagtcc
acctatggcaaaagcctggctatcatgactgaagctcagttgtccaccaccattattgag
aatccagagatgctcaagtaccagcagaggcagcagcagggggatcagaagaattcctca
attcgggaaggctctgggaattccacagctcccaaagtggcaagcatggttaatggggag
agtctggaggacatcagaaagaatctcttaaaaaaacaagtggaaacacgaacggcagat
ggccggagaaggatcacacctctctgcatagctcaactggacactggggatttttctaca
gcatttttcaatagcatcccaatatctggaactctgtctggctcaatgatgtcttctcaa
agtaaccagcagctcatgtcactagattcgaacgcagcaaattcccttaatacttcaaag
ccttctgtagagccaacagcagccagtataaaaccaacagatgatgcagccaataaagat
ggtgtaaatgctacctctgcctcagctgctccttctgcatcgtcttcctctgtgttgaca
actccatccaagattgagcccatgaaagcatttgattctcgattcacagaacgatccaaa
gccacctcagggactgctgttgtaacaaacacaaaccagactgttgtggacagactgaag
gatcagaatttaattaaagacaataagcccaaggatattctggagagcagcagtgacagt
gaagagaagattccagctgtcaaaccactcagcgtacccaaacggaaactggaacttgag
ggagaaacagtagaaaagaagaaaaaagggaggcctaggaaagactccagacttgtacca
gtaactttaactgttcagtccccagctacactggcctctgagaaggatgctgcttgcatc
tctgcaccagcattagcacttaaactgccaaccccaatcccacagaaatcgtttactttg
caaatatgttcagatccgtcaatgtaccttgaagtggagaatgaaatgaccacagtgggg
ggctcaaagctgagcaggttaaagtgtaatagggaagggaaggaatgggagacagtcctg
accagtcgaatcctcgctgcagcaggaagctgcgagattgtaactgtggcctgtgagaaa
cgaacgctgtcagtattctcagcttgtggtcgtcgccttcttcctcctataatattgaac
acacccatttccaccctgcactgcacaggctcctgcatcatggctctcaccactgctgct
acgctctctgtttgggatgttcacaagcagacagccattgtcagagacgagtctttgcaa
acaatattttcaggaagtgatgcaactgtttctcagatcttgctgactcagcatggaatt
cctgtcatgagcatgtctgatgggaaggcatactgctttaatccttctctttctacatgg
aatcttgtttctgacaaacaggactctctagcacaatgtgcagacttcaggactagtttg
ccatctcaagaagccatgcagtgttctgggcccttggctgtcatacagggacgcacatcc
aattcaggaaggcaagctgcaagattgttctccatgcctcatttagtgcaacaagaaaca
acacttgcatacctggagaaccagatagcagcagcacttattttacaatccagtcacgaa
tatcaccactggctccttatctatgcacggtacctagttaatgaagggtttgaatatcgt
ttgcgagaattatgcaaggatttactgggtccagtccattactcagctggaagtcagtgg
gaatcaacagttatgggtttacgaaagagagaactattgaaagagcttcttcctgttatt
ggacagaacctccgcttccagaggcttttcacagagtatcaagagcagctggacatcttg
agagacaagtag
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integrated database retrieval system
