Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454722
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Entry
135454722 CDS
T09958
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04142
Lysosome
zle04144
Endocytosis
zle05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135454722 (CLTCL1)
04142 Lysosome
135454722 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135454722 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135454722 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135454722 (CLTCL1)
Membrane trafficking [BR:
zle04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
135454722 (CLTCL1)
Exosome [BR:
zle04147
]
Exosomal proteins
Proteins found in most exosomes
135454722 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
135454722
NCBI-ProteinID:
XP_064583168
LinkDB
All DBs
Position
15:8397266..8431910
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGNYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMEHSLLQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEDLIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLFLVKPYLRSVQNHNNKGVNEALNNLLTEEEDFQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVAEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgcccattcgcttccaggagcacttccagctccaaaatttgggcatt
aatccagcaaacattggattcagcaccctaacaatggagtctgacaagttcatctgcata
agggagaaagtaggagagcaggcacaagtagtgataattgacatgagtgatccaacaaca
cccatcagacgtccaatttctgcagaaagtgccatcatgaatccagcctctaaagtaata
gcactcaaagctgggaaaacacttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccacacaatggctgaggaagtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtgacagagacagcagtgtaccactggagcatggagggagaatcacaaccccaaaag
atgtttgatagacatgctagtcttgcaggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtactcagttgatagaaaagtctcccaacctatagaaggccatgcagcagca
tttgcagaattcaaaatagagggaaatgccaaaccttctaccctcttctgttttgctgtg
aggagtcctgcaggaggcaagctgcacataatcgaagtaggtcagccagctactggaaat
cagccatttgttaagaaagctgttgatgtgtttttcccacctgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcatggtgtgatttatctgatcacaaagtatgga
tatatccacatgtatgacttggagtctggagtgtgcatctacatgaaccgtattagtgct
gacactatctttgtcacagctcctcatgaacctacctcaggcattattggtgtgaacaaa
aaaggacaggtgctttctgtatgtgttgaggaagacaacattgtgaactatgctacgaat
gttctccagaatcctgacttgggactgcgaatggctatacggagtaacctggcaggggca
gaggagttgtttgccagaaagttcaacacactgtttgctcaaggaaactatgcagatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaattaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccctgctccagtactttggaata
ttgctcgaccagggccagctgaacaagtttgaatctctggagctctgtcgccccgtcctg
cagcagggccgcaaacagcttctggagaagtggctgaaggaagacaagctggagtgctcg
gaggagctgggagacttggtgaagacggctgacccaacccttgcactcagcgtctacctt
cgagctaatgtgccaaacaaagtgatccagtgctttgctgaaactggccaattccagaaa
atagtgctgtatgctaagaaggttggctacacccctgactggatcttcctgctgagaagt
gtgatgagagtcagtccagaacaaggcctgcagttctctcagatgctggtgcaggatgag
gagccactggcaaacattaaccagattgtggatgtgttcatggagcacagtctgctgcag
cagtgcacatcctttttgttggacgccctgaaaaataaccgccctgcagaaggccacctt
cagacccgtctcctggaaatgaatttgattcatgccccgcaggtcgcagatgccatcctt
ggaaaccaaatgtttacacactatgatcgtgctcatgttgcccagctgtgtgaaaaggca
ggcttgctgcagcgagctttggaacactacacagatctctatgatattaaacgtgcagtt
gttcacactcacctcttgaatcctgagtggctcgtgaacttctttggctctctctcagtt
gaggactctgtggagtgtttgcgtgccatgctgtcagccaacattcggcaaaacctacag
ctctgtgtgcaggttgcttctaaataccatgaacagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
tttagccaggatcctgatgttcacttcaagtacatccaggcagcttgcaagactggtcag
ataaaggaagtggaaagaatctgtcgtgaaagtaactgctataacccagaacgagtgaag
aacttcctgaaggaggcaaagctcacagatcagcttcctctgatcattgtctgcgatcgg
tttgactttgttcatgacctggtgctctatttgtatcgcaataatctgcagaagtatatt
gagatctatgtacagaaggtgaatcctagccgtataccagcagtggttggagggcttctt
gatgtagattgttctgaagatgtcatcaagaacttgatcatggtggtgagagggcagttc
tccacagatgagctggtggctgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggcttgaatcgaggattcatgaaggctgtgaagaacctgcaactcataatgctttggcc
aaaatctacattgacagtaataataatccagagcgcttccttcgtgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgct
tatgagagggggcagtgtgatctggaactcataaaggtgtgcaatgagaactccctgttt
aagagcgaggctcgctacctggtgcgcaggaaggaccctgagctctgggcaaatgtactg
gaagaaaacaacccattcaggcggcagcttattgaccaggttgtccaaacagctttatca
gagacacaggatccagaggaagtttctgtaactgtgaaagctttcatgactgctgatctg
ccaaatgaactgattgaattattggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaatctgcagaacctgctgatcctgactgccattaaggccgaccgcacccgagtg
atggagtacatcaatcggctggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctatatgaggaagcctttgctatattcagaaaatttgatgtcaatacttca
gcaattcaggtgctgattgagcacattggcaacttagaccgtgcttatgaatttgcagag
agatgtaatgaaccagcagtgtggagccagctggccagagcacagctccagaaggacttg
gtgaaggaagccattgactcctatataaaagcagatgatccatctgcctacatggaagtt
gttcaggcagctaatagaaatgataattgggaggacctagtcaagttcttacagatggcc
aggaagaaggccagggagtcttatgtagagacagaacttatttttgctttggcaaaaact
aatcgtctgtcagaactggaggagtttattagcggccctaataatgcccatatacaacag
gtcggtgatcgctgttatgaagaggggatgtacgaagcagcaaagctcctctataacaac
gtgtccaactttgctcgcctggcatctaccctggtgcaccttggggagtatcaggcagca
gtggacagtggccgcaaagccaatagcacaaggacttggaaagaggtctgctttgcctgt
gtggatggaaaagaattccgcttggcacagatctgtggcttgcacatagtcatccatgct
gatgaacttgaggagctgatcagttactatcaggatcgtggctactttgaagacctcatt
gcccttttggaagctgctctgggcctagagcgtgctcacatggggatgttcactgaactt
gccatcttatactccaaattcaagcctcagaaaatgagagaacatctggaacttttctgg
tctagagttaatattccaaaggttctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctgtatgacaagtatgaggagtatgacaatgcaataattactatgatgaat
catcccactgatgcctggaaagaaggccagtttaaagacataattgccaaggtggccaat
gtggagctgtactacaaagccttgcagttctacttagactacaaacctctgctgatcaat
gatctcctgcttgtattatctccacgactggatcacaccaggacagtcaattttttctca
aaggttaatcagctatttctagtaaagccttacctgcgttcagtccagaaccacaacaac
aaaggagttaacgaagctctaaacaaccttttaacagaagaggaagatttccagggtttg
agagcttccattgatgcctatgacaactttgataacataacattggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcgtacttgtacaagggtaacaaccgc
tggaaacagagcgtggagctgtgcaagaaagatcgtctgtataaggatgctatgcagtat
gctgcagagtccaaagatgcagagctggctgagaagctgctccagtggttcttggaagaa
ggcaagcaggagtgctttgcagcctgccttttcacatgctatgacttgctgcacccagat
gtagtccttgagttggcatggagacataacatcatggactttgcaatgccttatttcatc
caagtgatgagagagtaccttaccaaagttgatggactattctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtagctgaacccactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtacctccccaggcaaacttc
ccatatggatacacagcaccaggattcacccagccgcctgtttatggtttcaatatgtaa
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integrated database retrieval system
