Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454794
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Entry
135454794 CDS
T09958
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zle03041
]
135454794 (TFIP11)
Spliceosome [BR:
zle03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
135454794 (TFIP11)
Other components
Complex C specific factors
135454794 (TFIP11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
135454794
NCBI-ProteinID:
XP_064583351
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All DBs
Position
15:complement(4689843..4698016)
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKAAAEELSDEDSDDDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTTQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRISKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcacggacggagacgatggcgtggagatggagagcttc
gaggtgtcggactgggacctgcagaacgaattcaacccgcaccggcagcgacaccgccag
accaaggaggaggcgacctacggcgtgtgggccgagcgcgactcggacgaggagcggccc
agcttcggagggaagcgctccagggattactcggcccccgtgagctttgtgagcgctggg
ctgaggaaggcggcggccgaggagctctcggatgaggactcggatgatgatgagaagcct
gtgaagcaggaggagattcccaaggagtttgtgcccaagaagttaaagacaggtggaaat
ttcaagcccagccagaaaggctttgtagggggctccaagtcctttgtggattttggcagc
tgggagagacacactaaaggcattgggcagaagcttctccagaagatgggatatgtccct
ggaaggggtctggggaagaatgctcaaggaatcatcaaccccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggcgcttatggctccgagaggaccacgcagtccttgcaggac
ttccctgtggtggactcagaagaggaagctgaggaggagtttcagaaggagctcagccag
tggcggaaggacccgaatggaggcaagaaaaagcccaagtacagctacaagacagtggaa
gagctgaaagccaagggcaggatcagcaagcagcttgcagcccctcagaaggagctgtcc
caggtcaaggtgatcgacatgacgggccgggagcagaaggtttattacagctacagccag
atcagccacaagcacaacatccctgatgacagcccccagcagcccctgggcaaggactcc
aaaccccagggctttgccctgcccgagctggagcacaacctgcagctgctcatcgacatc
acagagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctcagccacgagatccagaagatggctgaggtgctgtcccacgaggagaaggccatc
agcaacctcagcaaggttctggatatggtggaggagtgtgagaggcggatgcagccgggc
tgtgagaaccctctgaccctggacgagtgtgcaaagatctttgagaccctgcaggacaag
tactatgaggagtacaggatgtcagacagggtggacctggcagtggccatagtttatcct
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacatatggcacagag
atcatagccaagtggaagagccttctggaaaacgatcagctgttatcccacagtgggcag
gacctgtcaacagatgctttccacagactgatgtgggagatctggatgccatatgtcagg
aacatcgtggcgcggtggcagccgaggaactgcggatccatggtggatttcttggatagt
tgggtgaacgttgtccctgtgtggatactggataacattctggatcagctcatcttcccc
aagctgcagaaagaggtggagagctggaaccctctgacggacacggtgccaatccactcg
tggatccacccctggctgccgctgatgcaggcgcgcctggagccgctctactcgcccatc
cgcaacaagctggccaacgccctgcagaagtggcaccccagcgactcctctgccaagctc
atcctccagccctggaaggatgtgttcactcctggctcctgggaggctttcatggtcaag
aacatcgtgcctaaacttggaatgtgtctgaatgagctcatcatcaaccctcaccagcag
cacatggatgctttttactgggtgatcgactgggaggggatgatttctgtgtccagcctc
gttgggctgctggagaaacatttcttcccaaaatggctgcaggtgctctgctcttggctc
agtaacagccccaactacgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctggcacatccctccatcaaagacaagttcaacgaagcccttgacatc
atgaacagggctgtgtcctccagcgtgggtgggtacatgcagccaggtgcccgggagaac
attgcgtacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcccagcgcggcatcggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgccc
gtcatcggcaagaggcatgagggcaagcagctctacaccttcggcaggatcgtcatctac
atcgacaggggcgtggtgttcgtgcaaggggagaagacctgggtgcccacctcactgcag
agcctcattgacatggccaagtga
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