Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454816
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Entry
135454816 CDS
T09958
Symbol
UBE3B
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135454816 (UBE3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135454816 (UBE3B)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135454816 (UBE3B)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
HECT type E3
135454816 (UBE3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
135454816
NCBI-ProteinID:
XP_064583403
LinkDB
All DBs
Position
15:4141961..4163671
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AA seq
1070 aa
AA seq
DB search
MFSASQSSRAQFLDKARQAREERRELKERERAAVQLQALVRRFLCRCHLQRDIRREVDDF
FGTNECGSSKRSALSVFRIARKLLFVFNAKEDKERFEKLCRCILTSMDVENEPKVWYVSL
ALSKDLTLLWIKQIKDILWFCCEFLKQLKPDILQDSRLVNLHLTMLVTFTDTSTWKILRG
KGETLRPAMNHICANIMGHLNQKGFYSVLQILLTNGLARSRPSLSKGSLTAIFSLALRPV
VAAQFSDNLLRSFLIHVMSVPAIMTHLATLTPERLAVMESHDLFRKFILFLSRESQCRDV
CVCLEGSHTLCLLGNLVFLGSLNDQVLEEETAHFVGVLIQMLSYCQKYVSQKKSNLTHWH
PVLGWFSQTVDYGLNESMPLLTKQLQHLWGVHMIRILFNDVLSKKLLENQEIAQLPAQPI
SPQNSLPMKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTTLTTLTQIR
LQILTGLTYLDDLLPKLWAFICELGPQGGLKLFLECLNNDTEESKRLLAMLMLFCDCSRH
LITILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENARGETLELFHSVHGWL
MVLYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDKKRAQLLLQYIPHVIPHKNRVLLFR
NMVTKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQNAMKGVIRVKFVNDL
GVDEAGIDQDGVFKEFLEEIIKKVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFV
GKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDG
DISDLGLTLSYDEDVMGQLVCHELVPGGKTIPVTNENKISYIHLMAHFRMHTQIKSQTSA
LIGGFRAIIKPEWIRMFSAPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWD
ILANDFSPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGF
FTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILREKLRYAISMNTGFELS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgccagccaatcctccagggcgcagttcctggacaaggcgcggcaggcgcgc
gaggagcggcgggagctcaaggagagggagagagcagcagtgcagctccaggccctggtc
aggaggttcctgtgtcgctgccacctgcagagggacatcaggagagaggtggatgatttc
tttgggacaaatgaatgtggctcaagtaaaagaagtgccctgtctgtgttcaggattgcc
aggaagctgctgtttgtgttcaatgccaaggaggacaaggagaggtttgaaaagctgtgc
cgttgtatcctgaccagcatggatgtggagaacgagcccaaggtgtggtacgtgtcactg
gcactctccaaggacctcacactcctctggatcaagcagatcaaagacatcctgtggttt
tgctgtgaattcctcaagcagctcaagcctgacatcctgcaggactccaggctggtgaac
ttgcacctcacaatgctggtcaccttcacagacacttccacctggaaaatcctccgggga
aaaggtgagaccctgagacctgccatgaaccacatctgtgccaacatcatgggccacctg
aaccagaagggcttctactccgtgctgcagattttgctaactaatggcttggcaagatcc
agaccttccctgtccaaaggttccttaactgccatcttctccctcgccttgcgccctgtg
gttgctgcacagttctcagacaatctgctgaggtccttcctgatccatgtcatgtctgtg
cctgctataatgactcaccttgctactctcacccctgagcgcctggcagtgatggaatcc
cacgatctcttccgcaagttcatcctgttcctgagccgggagtcgcagtgccgggacgtg
tgcgtgtgcctggagggcagtcacaccctctgcttgctgggcaatctggtgttcctgggc
tccctgaatgaccaggtgctggaggaggagacagctcattttgtgggggtgctcatccag
atgctctcctactgccagaagtacgtgtcccagaagaaatccaacctcacccactggcac
cctgtgctgggctggttctcacagactgtggattatgggctgaacgagtccatgcccctg
ctgaccaagcagctgcagcacctctggggggtccacatgatccggatcctcttcaatgat
gtgctcagcaagaaactgctggaaaatcaggagatagctcagctgccagcacagccaatc
tcccctcagaacagccttcctatgaaaaacctgttcaagagagctttccagaagtcggcc
tcagtccggaacatcctgaagccggtgggagggaagcgcgtggactctgccgaggtgcag
aaggtttgcagcatctgtgtcctgtaccaaaccaccctgaccaccctcacccagatccgc
ctgcagatcctcacaggtctcacttacctggatgatctgctgcccaaattgtgggctttc
atctgtgagctgggaccacagggagggttaaaactctttttggagtgtttgaacaatgac
acagaggaatccaagaggctgctggccatgttgatgctcttctgtgactgctcccgtcac
ctcatcacgattctggatgacatcgaggtctatgaagagcagatttcattcaaactggaa
gagctggtgaccatctcctctttcctgaattcctttgtgtttaagatgatctgggatgga
attgtagagaatgcccgaggggagaccctggagctgttccattctgtgcatggctggctc
atggtgctgtacgagcgcgattgtcgccggcgcttcgctcccgaggatcactggctgcgc
aaggacctcaaacccagcgtgctcttccaggagctggacaaggacaagaaacgagcccag
ctgctcctgcagtacatcccacatgtcattccccacaagaacagggtgctgctcttccgg
aacatggtgaccaaggagaaggagaagctggggctggtggagacgagctcggcgtcccct
cacgtcacccacatcaccatccgccgctcccgcatgctcgaggatgggtacgaacagctc
cggcagctttcccagaacgccatgaagggagtgatcagggtgaagtttgtcaatgacctg
ggggttgatgaggctggtattgatcaagatggggtcttcaaagagttcctggaagagatc
attaaaaaggtgtttgaccctgcactgaacctgttcaagaccaccagtggtgatgagagg
ctgtatccatccccaacatcctacatccatgagaactacctgcagctctttgagtttgtg
gggaagatgcttgggaaggctgtgtatgagggaatagttgtggatgtgccatttgcttcc
ttctttctgagtcagctccttgggcaccaccacagtgtcttctacagctccgtggatgaa
ctgccctccttggactcagagttctataaaaatctcacctcaattaagcgttatgatggt
gacatcagtgacctgggcttgacactgtcctatgatgaagatgtgatgggtcagctggtt
tgccatgaacttgttcctggagggaagaccattcctgttaccaatgaaaataagatcagc
tacatccacctgatggctcatttccggatgcacacccagatcaagagccagacctctgcc
ctcatcggtggcttcagggccatcatcaagcccgagtggatccgcatgttctccgcgccc
gagctgcagcgcctcatctccggggacaacgccgagatcgacctcgaggacctgaagaaa
cacacagtgtactacgggggcttccatggcagtcaccgtgtcatcatctggctctgggac
atcctggccaacgacttcagccctgaggagagagccatgttcctcaagtttgtcaccagc
tgctccaggcctccacttctgggctttgcctacctcaagcctcctttctccatccgctgt
gtggaagtgtctgatgaccaggacacgggggacacgctgggcagcgttttgcgcggcttc
ttcaccatccgcaagaaggagccgggcgggcgcctcccgacctcctccacgtgcttcaac
ctcctcaagctccccaactacagcaagaagagcatcctgagggagaagctgcgctacgcc
atcagcatgaacaccggcttcgagctgtcctag
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