Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454825
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Entry
135454825 CDS
T09958
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zle03037
]
135454825 (TTC28)
Cilium and associated proteins [BR:
zle03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
135454825 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_16
TPR_11
TPR_NPHP3
TPR_6
TPR_9
TPR_17
TPR_19
ANAPC5
Motif
Other DBs
NCBI-GeneID:
135454825
NCBI-ProteinID:
XP_064583425
LinkDB
All DBs
Position
15:complement(5152410..5260526)
Genome browser
AA seq
2474 aa
AA seq
DB search
MEQQAPPPPPGAVAVGRARREQDAEPPRLSFCGSKSLRRKSPESPMLSKAEFVEKVRQSN
QACHDGDFHTAIVLYNEALGVDPQNCILYSNRSAAYMKIHQYDKALDDAIKARLLNPKWP
KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRESLEPTYQQL
QKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWS
LGNTEKSTGYMQQDLDVAKSLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMK
LKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIA
MGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQE
LAEKAIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIAESLQDRAAEGRASSNLGIIHQM
KGDYDTALRLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME
VNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCT
RGEFVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYEEAVKYYEQDLALAKD
LHDKLSQAKAYCNLGLAFKALMDFNKAEECQKYLLSLAQSLNNSQAKFRALGNLGDIFVC
KKDVHGAIKFYEQQLSLAHHVKDRRLEANAYAALGSAYRMVQKCDKALGYHTQELEVYQE
LGDMSGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPSIEAQVYGNMGITKMN
MNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDFEEAIKYYEQYLSV
AQSLNRMQDQAKAYRGLGSGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGSL
HSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYETALQYHQLDLQI
AEETKNPAGQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRT
HHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEESQHQLYRASAL
FETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYSPVTLDQVLETVNGQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEYYLG
DSLTENAGDFHEANGVALQTLTNSALEQHISSVREALGVDSYYTRACASSETESEAGDIM
DQQFEEMNNKLNSMTDPTGFLRMVSRNNLLNRSCQSMTSLFSSTMSPVKDGTSSLPRRQT
SFTKPPLRALYDLLIGPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYL
YERFSLIAVPSIQSLNPSSKSHVRKNTPAYSSSTSMAAVIGNPKLPSAVMDRWLWGPMPS
AEEEAYMVSELLGCQPLVGSSSTKERVMSALTQAECVHFATHVSWKLAALVLTPNTDSNP
ASSKSSFGNPYTIPESLRMQDDASDVESISDCPPLQEFLLTAADVLDLRLPVKLVVLGSY
QESNSKVTSDGVIGLTRAFLAAGAQCVLVSLWPIPVAASKMFVHAFYSSLLNGMKASAAL
GEAMKTVQSSKQFSHPANWAGFMLIGSDMKLNSPSSLVGQALTEILQHPDRARDALRVLL
HLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGLPAAVFFP
TSDPGDRLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLINRAVRNVVGMLHQVLVQ
LQAGEKEQDFPSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQATRRT
MHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPQYQNPPFSPTCPDSLAS
DAISVYSLSSIASSMSFVSKPENMLDGAGHRGRQDYERPKNIYPHRSAAQSQLSPQATAA
SKDEEEYEGFSIISNEPLASYQENIKPRFSPDHKQPKTSQNGGIKASINSKGSISTPNSP
VKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSNAKLDPQELAQKILEE
TQSHLIAVERLQRSSSSQISKSSSSEDGAPSPGGVSAFRSSETSAFSRPLSSSHRNQASS
PLAIKPKPPTRSSSLQKVSSGYNSPTTSEMSNREGTGQYSGQPSPGCDSHGSLSEQPPFK
LKYPSSPYSAHISKSPRNISPSSGHQSPGGSTPSPALSYSSAGSARSSPADAPDIDKLKL
AAIDEKVQAIHNLKMFWQSTPHHSTGPIKILRGAPGTMTSKKDVLSLLNLSPRHSKEDSA
EKLELKDLSIGQHLAASPQKIPPNGHRCPETTNSMASAHSSPGNTLGAVRPLRLPAGNGY
KFLSPGRFFPSSKC
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaggcgccgccgcccccgccgggggccgtggcggtgggccgggctcggcgg
gagcaggacgcggagcctccccggctttctttctgtggatcaaaatccttgagaagaaaa
agtcccgagagtcccatgctgagcaaagccgagtttgtggagaaggttcggcagagcaac
caggcgtgccatgacggcgacttccacacggccatcgtgctctacaacgaggcgctgggc
gtggacccccagaactgcatcctctacagcaaccgctctgcagcctacatgaaaatccac
cagtatgacaaggccctggatgatgccatcaaggcacggctcctcaatcccaaatggcca
aaggcatacttccgtcagggcgtggccctgcagtacctgggacgccatgccgacgctctg
gccgcctttgcctcggggctggcgcaggatcccaagagcctgcagctcctggtgggcatg
gtcgaggccgccatgaagtctcccatgcgagagtccctggagcccacctaccaacaactg
cagaagatgaagctggacaagagcccctttgttgtggtgtccgtgattggccaggagctc
ctgactgcaggccaccacggggcctctgtggtggtgctggaggctgccctgaagattggc
acgtgcagcctgaagctgcggggctcggtgttctctgcgctcagcagcgcctactggtcc
ctggggaacacggagaaaagcactggatacatgcagcaggacttggacgtggccaagagt
ttaggtgaccagacaggagaatgccgagctcatggaaatctgggctctgcattcttctcc
aaaggaaattaccgggaagcccttactaaccacagacatcagctggtgcttgccatgaag
ctcaaggacagagaggcagcatcctcagcactgagcagcctgggccacgtgtacacagcc
atcggggactaccccaacgccctggccagccacaagcagtgcgtgctcctcgccaagcag
tccaaggatgagctctccgaggcgcgggagctgggcaacatgggagcagtgtacatcgcc
atgggggactttgagaacgcagtgcagtgccacgagcagcacctgaagatcgccaaggag
ctgggcaacaagcgggaggaggctcgagcctacagcaacctgggcagtgcttaccactac
cgcaggaacttcgacaaggccatgtcctaccacaactacgtgctggagctggcccaggag
ctggctgagaaggccattgagatgagagcttatgctggcctgggccatgcagctcgatgt
atgcaagacctggagagggctaagcagtaccatgaagagcagttgcacattgctgagagc
ctgcaggaccgagctgctgaaggcagagcctcctccaatctaggaatcattcaccagatg
aagggtgactatgacacggcgctgcggctgcacaagacacacctgtccatagcgcaggag
ctgagcgattacgcggcccagggccgggcctacggcaacatgggcaacgcctacaacgcc
ctgggcatgtacgaccaggccgtcaagtaccaccggcaggagctgcagatctccatggaa
gtcaacgaccgagcttctcaggcatccacacacggcaacctggctgtggcttatcaggct
ctgggggcccacgaccgcgctctgcagcactaccagaatcatctcaacatcgcccgggag
ctgcgggacatccagagcgaggcacgagccctcagcaatttgggcaacttccactgcaca
cggggagagttcgtgcaggcggctccgtactatgagcagtacctgcgcctgtccccagag
ctgcaggacatggagggagaggggaaggtttgccacaaccttggctatgcccattattgc
ctcgggaactatgaggaagctgttaagtactacgagcaggatcttgccctagcaaaggat
cttcatgacaagctgagccaagccaaagcctattgcaacctcggcttggccttcaaagcc
ttgatggacttcaacaaagcagaggagtgtcaaaagtacctgctgtccctggcacagtct
ctgaacaattcccaggccaaattccgagctctggggaacttgggggatatttttgtctgt
aaaaaagatgtacatggtgcaataaaattttatgagcagcagttgagcttagcccatcac
gttaaagacaggaggctggaagccaatgcctatgcagccctgggctctgcatacaggatg
gtgcagaagtgtgacaaggctttgggttaccacacgcaggagctggaggtgtaccaagag
ctgggggatatgtcgggtgaatgcagagcacatggtcaccttgctgcagtgtacatgtca
cttgggaagtacaccatggccttcaagtgctacgaagagcagctggagctggggcagaag
ttgaaggaccccagcattgaagcccaggtctacggtaacatgggcattaccaagatgaac
atgaatgtcatggaggaagccattggctactttgagcagcagctggccatgctgcagcag
ctcagcgggaatgaatccgtactggatcggggccgagcctatgggaacctgggagattgt
tatgaggctctgggagattttgaggaagctataaagtattatgaacagtacctgtctgtg
gctcaaagcttgaaccgtatgcaagatcaggcaaaggcctaccgaggcttgggcagtggg
cacagggccatgggaagtttacagcaggctctggtgtgctttgagaagaggctcgtagtg
gcacacgagctgggggaggcatttaacaaagcccaggcttacggggagctggggagcctg
cacagccagctgggcaactacgagcaagccatctcttgcctggagaggcagctgaacatc
gcccgggagatgaaggaccgagccctggagagcgacgccgcctgtggcctgggcggggtc
taccagcagatgggcgagtacgagacagccctgcagtaccaccagctggacctgcagatc
gccgaggagaccaagaaccccgcggggcagggccgcgcctacggcaacctgggcctcacc
tacgagtccctgggcacctacgagagggctgtggtgtatcaggagcagcacctcagcatc
gcggcgcagatgaacgacctcgtggccaaaaccgtgtcctacagcagcctggggaggact
catcatgctttacagaactactcgcaggctgtgatgtacctgcaggaaggactgaggctg
gcagagcagctgggtcgcagagaagatgaagccaaaatccgtcacggcctcggcctctcc
ctgtgggcgagcgggaacctggaggagtcccagcatcagctgtaccgtgcctccgcgctg
tttgagaccatccgccacgaggtgcagctgagcactgactacaagctgtccctcttcgac
ctgcagacatcctcctatcaggccctgcagcgagttcttgtcagcctgggtcaccatgac
gaggcattggcagtagcagagagaggacgaacgagggcttttgctgacctgctcgtggaa
cgtcagactgggcagcaggactcagatccctactctcctgtgacccttgaccaggtcctg
gagactgtgaatggccagaggggacttgttctctactactcactggctgcaggttatctg
tacagctggctgctggctcctggggcaggaattctgaaattccatgagtattatctgggt
gacagcctgacagaaaatgctggggacttccatgaagccaacggcgtggccctgcagaca
ctgacaaactcagcactggagcagcacatctccagcgtgagggaggctctgggggtggat
tcctattataccagagcctgtgctagcagcgagacagagagtgaagctggggatatcatg
gaccagcagtttgaggagatgaataacaagctgaactcaatgactgatccaactggcttc
ctgaggatggtcagcaggaacaacctattgaacaggagctgtcagagcatgaccagcctg
ttcagcagtaccatgtctcctgtaaaggatggaacatcatcacttcccaggaggcagact
tctttcaccaagccccccctccgtgctctctacgacttactgataggacccatggaagga
ggtttgatgcattccagtgggcctgtgggccgccaccgccagctggtcctggttctggag
ggagagctgtacctcattccctttgctctgctgaagggcagctcctccaacgagtacctc
tacgagcgcttcagcctcattgcagtgccctccatccagtcactgaaccccagctccaag
tcccatgtgaggaagaatactcctgcttactccagttctacctcaatggcagctgtgata
ggaaatcccaagctcccttcagcagttatggacaggtggctctggggacctatgccctct
gcagaagaggaagcctatatggtgtctgagttacttggctgccagcccttagttggcagc
tcatcaacaaaagaaagagtcatgagtgccctgactcaggcagaatgtgtccattttgca
acccacgtctcctggaaactggctgccttggtcctgacacccaacactgacagcaaccca
gccagcagcaagagctcctttgggaacccctacacaatcccagagtctcttaggatgcag
gatgatgccagtgatgtggagagcatctcagactgccctcctctccaggagttcctgctt
acagcggctgacgtgctggatctgcgtcttcctgtcaagctggtggttcttggctcttac
caagagtccaacagcaaagtcacttctgatggagtcattggcttgacaagagcattcctg
gctgctggggctcagtgtgtccttgtgtccctctggcccattcctgtggctgcttccaaa
atgtttgtgcatgccttctactcctctctcttgaacgggatgaaagccagcgcagccctg
ggagaagcaatgaaaactgtgcagagcagcaagcagttctcccacccagccaactgggca
ggcttcatgcttattgggagtgatatgaagctgaacagcccttcctcactggtaggacag
gccctgactgagatcctgcagcaccctgacagggcccgggatgctctgcgtgtgctcctt
catctggtggagaaatcattgcagcggatccagaacgggcagcacaactccatgtacacc
tcccagcagagtgtggagaataaagttggtggcattccaggctggcaggcactcctcaca
gcagtgggatttcggctggacccaccagccagcggcctcccagcagcagtgttcttccca
acctcagaccctggggacaggctgcagcagtgcagcaccaccatccagtccctgctaggt
ttgcctaaccctgcacttcaggcactttgtaaacttatcacagcttcagaaacaggagag
cagcttatcaacagggctgttagaaatgtggtgggaatgctgcatcaagtcctggttcaa
cttcaagcaggagaaaaggagcaagatttcccctctgcaccaatccaggtctccatcagt
gtccagctctggaggctgcctggctgtcatgagtttctggcagctctaggttttgacctt
tgtgaagttggccaagaggaggtcattctgaaaactgggaaacaagctaccaggaggacc
atgcactttgctctacaatccttgctggcactttttgattctacagagctgcccaagcgc
cttagcctggacagttcctcatcactggagtcactggcttctgctcagtctgtttccaac
cctgtaccccagtatcaaaaccctccattctctcctacctgtccagacagccttgcctca
gatgccatttctgtgtacagcctgagctccattgcttcttccatgagctttgtttccaag
ccagagaacatgctggatggggcaggacacagagggaggcaggattatgagaggcccaag
aatatctatccacacaggtctgcagctcagagccagctgtcaccacaagccactgcagcc
agcaaagatgaggaagagtatgaaggtttctctataatcagcaatgagcctttggccagt
taccaagaaaacataaaaccaagattttcccctgatcacaaacagcccaaaactagtcag
aacggaggcattaaagcatccatcaactccaaagggagcataagtactccaaattctcct
gttaaaatgactctcatccccagcccaaattcacctttccaaaaagttgggaaacttgca
agttcagatactggggaatctgaccagtccagcactgagactgacagcaccgtcaaatcc
caggaggacagcaatgcaaagcttgatccacaagagttggcccaaaaaattctggaggaa
actcagagtcacctcattgctgttgaacgccttcagaggagcagcagcagccagatcagc
aagagcagcagctctgaggatggagctcccagccccggtggcgtgtccgccttccgctcc
tcagagaccagcgccttcagccgcccgctcagctccagccacaggaaccaggcttcttca
ccccttgccatcaaaccaaagcctccaacgaggagctcatcccttcagaaggtgagctct
ggctacaacagccccaccacgtcggagatgtcaaacagagaaggcacaggtcagtacagt
gggcagccgtctccgggttgtgactcgcatgggtccttaagtgagcagcctccctttaaa
ctcaagtatcccagctctccttacagtgctcacatttctaaatcacccagaaatatctct
ccgagctcagggcatcagtctcctggtggcagcactccatctcctgctctttcctattcc
tcagctggttctgctcgctcaagccctgctgatgccccagacattgacaaattaaagttg
gctgccatcgatgaaaaagtgcaagcaattcacaacttaaagatgttctggcaaagcact
ccccaccactccactggtccaataaagattctccgaggagctcctggaacaatgacttcc
aagaaagatgtcctcagcttgctcaatttatcaccacggcacagcaaagaagatagtgca
gagaagctggaactgaaggacctgtctattgggcaacaccttgctgcttcaccacagaag
atccctccaaatggacacagatgccctgaaaccacaaattccatggcatcagctcattcc
tcacctggcaacactctgggagctgtgcgtcccctgaggctgccagctgggaatgggtat
aaatttttgtcaccaggaagatttttcccttcctccaaatgttga
DBGET
integrated database retrieval system
