Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454876
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Entry
135454876 CDS
T09958
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135454876 (SEC16A)
Membrane trafficking [BR:
zle04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
135454876 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
135454876
NCBI-ProteinID:
XP_064583526
LinkDB
All DBs
Position
17:complement(2586441..2615619)
Genome browser
AA seq
2400 aa
AA seq
DB search
MQQPPQPVPPGAAPPPPAGVPVARNMYWRNSPLGRRANAAAAPVPPVTDPFAFGRQTPQG
SPLDQPPKGGAPAAFPPHGPHSSLPAPVPQAGLGTSSFPSVPVASPSPGYVINSAAEGHP
NADVGLRGPAAPLHYNPGAAVENSFSVHPGVVSAASKPGARQDVGRDANAAASAPTTAAL
FPPPPQQPGPQWRPVPGNLQSPVRNFVPYPEPSPQTDVHNISQPSVSASHPPPHTNVPQG
PGHQGIPQNVVQAPLPAGCERNGKNGPANSSHHMNSIQPGNVFRQNTDMTNPWSNQPYQE
QFYPQPPLQDSGFVLPTAQENNPKNQSPAMSETSNRSIPTDRDPGTLSMFFKGDEAENEE
ILSSEKKYVMEKTEFDACQQNSASLYHQPVHPQQVATNILSQAQLGSAGDMVQKGMDAQY
FPKLVSHQEAQAAKHSLFAGDDKAQIGDPAAGSQYENVENLECIQNQEVLPSEPQNINTS
SPAAGPDPYRYGSFPGQALPKNAVSHAEGGPNLEAPDSLPHPGRPDSVSSTYSSISHRSS
SSSARPPEHGGTFIQQEIGKPDEESSASFFKQIDSSPLGGDSGELNLSKNYHSNLSQPPT
PSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEIDQAKMVVELRENHSNQKNIKKNTAVPA
ASPGNLEQPPDNLETIYMPQVHPGTGEAGNTLHSGPVVENIQSVSERRSSTRAQGAVKKC
DSPATTLWAHNELPNFGGNVLLAPAAPAVYVPAKQTVEVIQPPEEGLSNQQPCKPGTIAV
QHSQDGNIAFENLENPPKMGEEEALQSQASSGYASLLSSPPTESLQNQPILIAQPNQSYN
LAQPINFSLSLSNQLSSNENNQPMKDSGVGDKPAMGPQSSHAGGENIPLPVMQVGSLLVN
ALPNTNLLKHNLLQSPVNSSDAASNQPANLLMKTPLNLSPEGQKNVNVEGLVPEFASKPG
SNSSVSPGTNLPSGSASGLVPPVNSIAQANNSANQSSSKEAAGVLDFTVPRTLEKSSTSN
SVQVHNQSPSGAAAQQAAGAAQVRPEVPDKQHFYQQVTKDVQHQAAAADRAAQPQMQAAQ
MQPPTSGQSSVPADSQISTGAKAMQQGDSQVLGNRAQPGGPQEGGSGQPRYDQTSPGKQP
VSEQPPGAPAATAPPASTAQAVPPNGQQDLQRPPPPQTPQEAFGPPQNPYYYYRHPYDAY
QAPYPPPYPPADPRTAAHLYYMEDSYGQYDPRYRHYEGSAAYMEPGSYRYPEPERPSSRA
SHCSDRPASRQGYTEDYYGKGGWSDYYSGYYPNSYDYGDPGRWERYPYDPRYRDPRSYDQ
RYWYDAEHNPYQKREAYPYGSRNERYEDNWRYDPRFTGSFDDEAEPARDPYGDDFERRSV
HSEHSGHSLRSSRSVHSHHSSFSSRSQQSQLYRSNHDLTAYEPPAQAVHADYPYGAYEPS
FDGQQPFPDYGYPAETAWSAVEQAPLRPSTPEKFSVPHICARFGPGGFLIKALPNLPSEG
QPALVEIHSMETMLQHSPEQEEMRAFPGPLAKDETHKVDVINFAQSKAAQCFKNENLIDK
ESASLLWDFIVLLCRQNGTVVGTDLAELLLRDHKTVWLPGKSPNEANLIDFNNEALEQVE
EESGEAQLSFLTDNLVTMVDSFEKETERFRELLLYGRKKDALESAMKHGLWGHALLLASK
MDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNL
TNNMDLESRTIATMGDTLASKGLLDAAHFCYLMAQVGFGVYTRKTTKLVLIGSNHSLPFL
KFATNEAIQRTEAYEYAQSLGSQPGCLPNFQVFKFIYACRLAEMGLAAQAFHYCEVISRT
VLKDPHYYSPVLIGQLIQMSSQLRLFDPQIKEKPEQESFIEPPWLVTLRHVDGQIKEGAI
AYNTDRSTPPPYECSTPSSELDRGSQGEGGGGRDVGPGAENPLLASLLPNMAQQMQSVQL
MPSVPQAVLDGSAAMIPPGDQGSVPFYPVAPQPLGPGPGFAPPGFSNPYGTEPSPPYLGT
TLPPGGPPQEIEPQPEEQTNLETGMQRIAPESPSQNSFPEQREDDFYGRMANMGYGRRSR
TTSESSAHSVGRERSNSAAKQPSPPPSAPAGKDTKKETKKEAAPRKTGGTWFRWLMGKGK
NEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESKPPPPPPTGFPKAAQAAPPGPGGPPGAS
VNVFSRRAAGSRARYVDVLNPGGTKASGAVPAPSDLFAPLAPMPIPANVFVPNSVPGESQ
PMEGSGAAEHTAAANQTNTDPAAAVEPEYLNPAALPPGSGLPVPNPDGSQSGELSRSSSM
SSLSREVSQHFNQPAAVPPSGAPSAGAVPFYNPSQFAQSPAATGSSRLGRIGQRKYPTLK
NT seq
7203 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccaccgcagcctgtccccccgggggcggctcctcctcctccggccggcgtg
cctgtggctcgcaacatgtactggaggaacagccccctgggcaggcgggccaacgccgcg
gccgcgccggtgccgcccgtgacggacccgttcgccttcggccggcaaaccccgcagggc
tcccccctggatcagccgcccaagggcggcgctccggccgcgttcccaccgcacggaccg
cacagctccctgccggctcctgtgcctcaggcagggctaggcaccagtagctttcccagt
gttccagttgcctctccgtccccggggtatgttataaatagtgctgcagaagggcatccc
aacgctgatgttggactccgtgggcctgcggcgcccttgcattataacccaggagcagca
gtggaaaattctttcagtgtgcatcctggggtggtgtctgcagcgagcaaacctggagct
aggcaggatgttggcagagatgcaaatgctgcagcttcagcacccaccacggcagcgctc
ttcccaccacctccccagcagcctgggccccagtggaggcctgtcccaggcaatctgcag
tctccagtccgcaattttgtgccctatcctgagccgtctcctcagactgacgttcacaac
atttctcagccttctgtcagtgcttctcaccctcctccacacacaaacgtcccacagggc
cctgggcaccaaggaattccacaaaatgtcgtgcaagcgcctttacccgctggctgtgag
aggaatggcaaaaatggccctgcaaacagcagccatcacatgaacagcatccaacctgga
aatgtgtttaggcagaacacagacatgactaacccttggtcaaaccaaccttaccaggaa
cagttttacccacagccacctttgcaagactcgggttttgtccttcccacagctcaggaa
aacaaccccaaaaaccagtctccagctatgtctgaaacgtcaaatagatctattcccaca
gatcgagatccaggaactctctccatgttcttcaaaggggatgaggcagaaaatgaagaa
atactttcatctgagaaaaaatacgtaatggagaaaacagagtttgatgcctgtcagcaa
aattcagcctccctgtatcaccagcctgtgcatcctcagcaggtggcaaccaatattctc
tctcaggcacagctgggttcagctggtgacatggtacagaaaggaatggatgcccagtac
ttccctaaacttgtcagccatcaggaggcacaggctgctaagcactctctgtttgctggt
gatgacaaggcacagataggtgacccagctgctgggtcccagtacgagaatgtggagaac
ctggagtgcattcagaatcaggaggtgctgccaagtgaaccccagaacatcaacacttcc
tcccctgctgctggtcccgatccgtacaggtacggatccttcccgggtcaggcgcttccc
aagaatgctgtgagccatgctgaaggaggaccaaacctggaggctcctgactccttacct
caccctggccggccagacagcgtctcttccacctacagcagcatcagccacaggagcagc
tccagctctgcacggcccccggagcacggcggtacatttatccagcaggaaattgggaag
cctgatgaggaatcctctgccagcttcttcaaacagatcgactcctctcctctgggaggt
gattcaggtgagctaaacctcagcaagaactaccacagcaatctatcccagcctcccact
ccaagtcctcctaagcctacaggagtgtttcagacaagtgcaaatagttctttcgaacct
gtgaggtcccatggagttggtataaaacctgcagagattgaccaagcaaagatggtggtt
gaattaagagagaaccactcaaaccagaagaatatcaagaagaacacagcagtgcctgct
gcatctcctggcaatcttgaacagccaccagataatctggaaacaatttacatgcctcag
gtacacccaggcactggggaggctggaaacacgctgcactctggacctgttgtggaaaat
atacaatcagtatctgagagacgctcctccaccagagctcagggagcagttaagaagtgt
gatagcccagcaacgactttatgggctcacaatgagttaccaaattttgggggaaatgtt
ctcctagctcctgctgctcctgcagtgtatgtacctgccaaacagactgtggaagtcatt
cagccaccagaagaaggcttgtctaatcagcagccatgtaaaccagggactattgctgtg
cagcactcccaggatggaaatatagcttttgaaaatcttgagaatcctcccaaaatggga
gaggaggaagcacttcagtctcaggcaagttctggttatgcaagtttattgtcttctcca
cctacagagtctttgcaaaatcagcctatcctgattgctcagcctaatcaaagctataac
ttggctcagccaattaatttttctctttctctatctaatcagctaagcagcaatgaaaac
aatcagccaatgaaggactctggagttggggacaagcctgcgatgggtccccaaagttca
catgctggtggggaaaacattccactacctgtgatgcaagttggatctctcctagttaat
gcacttccaaatactaatctgttaaaacataatttattgcaaagtcctgttaattcctct
gatgctgcttctaatcagcctgcaaacttgcttatgaaaactcctcttaatttgagtcca
gaagggcaaaagaatgttaatgtggaaggccttgttcctgaatttgctagcaagccaggg
tctaactcatctgtttctcctgggacaaatcttcccagtggaagtgcaagtggcctggtc
ccccctgttaattccatagcccaggctaataattctgcaaatcaatcaagtagcaaagaa
gctgctggagtgctggacttcacagtgccacggacgttggagaaaagcagcacaagtaat
tctgtccaggtgcacaatcagtcaccctctggtgctgcagcccaacaggcagctggtgct
gcccaggtgcgtcccgaggtgcctgacaaacaacatttctaccaacaggtgacaaaagat
gtgcagcaccaggctgcagcagcagaccgagctgcacagccacaaatgcaagcagctcaa
atgcagccaccaacatctgggcaatcctcagttcctgcagactcccagatttccacaggg
gccaaggccatgcagcagggggacagccaggtgctgggtaaccgtgcccagcctggggga
ccccaagagggaggttcaggccagccaaggtacgaccagacgagtcctgggaagcagccg
gtgtcagagcagcctccaggtgctccagctgccactgcccctcctgccagcactgctcag
gcagtgccacccaacgggcagcaagacctgcagcgtcctccccctcctcagacccctcag
gaggcctttggtccaccccagaacccttactactactacagacatccttatgatgcttac
caggctccatatccaccaccctatcctcctgcagaccccaggacagcagctcacctttat
tacatggaggacagctacgggcagtacgacccccggtaccggcactacgagggcagcgct
gcctacatggagcccggcagttaccgctaccccgagcccgagcggcccagctccagggcc
agccactgctctgacagacctgcctccaggcaagggtatacagaagattattatggaaaa
ggtggatggagtgattattattcaggctattacccaaactcctatgattatggagatcca
ggtcgctgggagcgatacccgtacgaccccaggtacagagacccgaggagttatgaccag
aggtactggtatgatgctgaacacaacccttaccagaagagagaagcatatccttatggc
agcaggaacgagcgatacgaggataactggaggtacgacccccggttcaccgggagcttt
gacgacgaggcggagccggcgcgggatccctacggggacgactttgagcggcgcagcgtg
cacagcgagcactcgggccacagcctgcgcagctcccgcagcgtgcacagccaccacagc
agcttcagctcccgctcccagcagagccagctgtacaggagcaatcacgatctcactgcc
tacgaaccccctgcgcaggcagtgcacgcagattatccctacggagcctacgagcccagc
tttgatggacagcagcccttcccagactatggctaccctgctgaaacagcctggtcagct
gtggaacaagcacctttaaggccctcaacacctgagaaattttcagtgcctcatatctgt
gccaggtttggccctgggggcttcttaataaaagcactgccaaacctgccttctgagggt
cagccagctctggttgaaatccacagcatggagactatgttacaacattctccagagcaa
gaagagatgagagcctttcctggtccccttgctaaggatgagacccataaagtggatgtt
attaattttgcacaaagtaaagctgcacagtgctttaagaatgaaaatttaattgacaaa
gaatctgcaagtcttctttgggacttcattgtactgctgtgcaggcagaatgggactgtt
gtgggaacagacctggctgaacttctgctccgagatcacaaaacagtgtggcttcctggc
aagtcccctaatgaggcaaatttgattgatttcaataatgaggctttggaacaagtggaa
gaggaatctggtgaagcccagctctcgtttctcactgataatcttgtaaccatggttgac
agttttgagaaggaaactgagagattcagggagttgctgctttatggccgtaagaaggat
gctttggagtctgccatgaagcatggcttgtggggtcatgctctgctccttgccagcaaa
atggacagcaggacacatgcaagagtgatgaccaggtttgccaacagtctcccaattaat
gaccctctgcagactgtttaccagctcatgtctgggaggatgccagctgcatccacgtgc
tgtggagatgagaaatggggagactggaggcctcatctagcaatggtgttatccaacttg
accaataacatggacttggaatccaggaccattgcaaccatgggagacactcttgcttct
aaaggcctgttggatgctgctcatttttgttaccttatggcccaagttgggtttggagtt
tacacaaggaagacaacaaagcttgtcctgattggatcaaatcacagtttgccatttttg
aagtttgccaccaatgaagccattcaaagaacagaagcctatgagtatgcacagtcacta
ggaagtcagcctggctgcttgcccaatttccaggttttcaagttcatctatgcctgtcgg
ctggctgagatgggccttgctgcccaggctttccactactgtgaggtgatttccagaact
gtcctcaaagatccacattactattcccctgtgctgattggccagctaatccagatgtcc
tcccagctgcgcctgtttgaccctcagatcaaagaaaaaccagaacaggaatcttttatt
gaacccccctggttagtgactcttcgacatgtggatggacagatcaaggagggtgcaata
gcctataacacagacagatccaccccccctccctacgagtgcagcactcccagctctgag
ctggaccgtggcagtcagggtgaggggggaggaggccgtgacgtggggccaggtgctgaa
aatcccttgctggcatccttgttacccaatatggctcaacagatgcagagcgtgcagctg
atgccttcagtacctcaggctgtccttgatggctcagctgccatgattcctcctggtgac
cagggaagtgtccccttctacccagtggctcctcagcctcttggcccaggacctggcttt
gcacctccaggattttcaaatccatatggaactgaaccatccccaccctatttagggaca
acattacccccaggagggcccccacaagaaatagaaccacagccagaagagcagacaaac
ttggaaacaggaatgcagagaattgccccagagtctccttcacaaaactccttccctgag
cagagagaggatgatttctatggcaggatggccaacatgggctatgggcgaaggtcccgc
acaacctcagagtcctctgctcattctgtgggacgagagagatccaactctgcagccaag
caaccctctcctcctccctctgctcctgcagggaaagacactaaaaaagaaacaaaaaag
gaggcagcacccagaaagactggtggaacctggtttcgctggctgatgggaaaaggaaag
aatgaggctcacctgccagatgacaagaataaatcaattgtttgggatgagcagaaacag
cgttgggttaatctggatgaaccagaagaggagagtaaaccccctcccccccctccaaca
ggatttcctaaagctgctcaggctgctccccctgggcctggaggcccacctggtgcttct
gtcaacgtgttctccaggagagcagctggaagcagagcccgttatgtggatgtcctgaat
ccaggaggaaccaaggcaagtggggctgttcctgcaccatcagacctgtttgcccccctg
gcacccatgcccattcctgccaacgtgtttgttccaaactcagttccaggggaatcccag
cccatggaggggagtggagcagcagagcacacagcagctgcaaaccaaaccaacacagac
cctgctgcagctgtggaaccagagtacttaaaccctgcagcccttcctcctggatctgga
cttcctgttcctaaccctgatggctcccagtcaggcgagctttcgcgctctagttcaatg
agttcattatcacgtgaagtaagccagcattttaatcagcctgctgctgttccaccctcg
ggggcaccttcagcaggggcagtaccgttctacaacccctctcaatttgcacaatctcct
gcagccactggaagttcaagactgggaagaattggacagaggaagtatccaacattgaag
tag
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integrated database retrieval system
