Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454878
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Entry
135454878 CDS
T09958
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135454878 (GAPVD1)
Membrane trafficking [BR:
zle04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135454878 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
135454878
NCBI-ProteinID:
XP_064583531
LinkDB
All DBs
Position
17:complement(769366..797924)
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AA seq
1488 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVSSEKALIQRLNADVLKTAERLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGF
MRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
GQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNMLMDQHGDHEGSSQETIPEVQPEE
VLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQ
LTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPS
FGCHALVPAELEAFKQRHSYPERLVRSRSSDIVSSGRRPMSDPGWNRRAGTEERELPVAS
SSAGAAALAAASQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIP
FRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVN
YDSAEALGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCS
ADSVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSR
FDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFT
TVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQL
QDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLR
EAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVL
IKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggacatccacacgctggcccaccacctgaagcaggagcggctgtacgtg
agctcggagaaggcgctgatccagcgcctcaacgccgacgtgctgaagacggcggagcgg
ctctatcgcacggcctggatctccaaacagcagcgcatcaacctggacaggctcatcatc
accagtgctgaagcttctcccgctgaatgttgccagcacgcaaaaatcttggaggacacg
cagtttgtggatgggtacaagcagctgggattccaggagactgcttacggagaattcctg
aacagactgagagagaaccccaggctgattgcgtcctgcctggttgctggagagaagctc
aaccaggacaacacccagagtgtcattcacacagtgttcacctccatctatggcaactgc
atcatgcaggaggacgagagttacctgctgcaggtgctgcgctacctgatcgagtttgag
ctgaaggaaagcgacaaccccaggcggctgctgaggcggggcacctgtgccttcagcatc
ctgttcaagctcttctctgaaggactcttttctgcaaaactttttcttactgctacctta
catgagccgatcatgcagcttctggttgaggacgaagaccacctggaaaccgacgcaaac
aagttaattgagagattctccccagtacagcaggagaagttatttggagagaaaggcaca
gaaaagttcaagcagagagtccaagagatggttgactctaacgaggccaagctggtgacc
ctggtcaacaaattcattggctatctcaaacaaaacacgtactgttttccccacagcttg
aggtggattgtgtcgcagatgtacaaaacgctgtcgtgtgtggacaggctggaggttggc
gaggtcagagccatgtgcacagatctccttctggcctgcttcatctgccctgccatcgtc
aaccccgagcagtacggcatcatttctgatgctcctatcaatgaggtggcaagatttaat
ctgatgcaggttgggagacttctgcagcagctggcaatgacaggctctgaggagggagat
ccacgtacgaagagcagccttgctaaatttgacaaaagctgcgttgctgctttcctggac
gtggtgatcgacgggcgcgcggtcgagacgccgccgatgtcggccgtgaacctgctggag
gggctgagccgcaccgtggtgtacatgacctacagccagctcactgccctggttggcttc
atgcggaacgtgatgtcaagcgatcagctcaaggaagatcggatggctttggaaaacttg
ctggcaaatttaccccagaacaagccagggaaaagcagcagccttgaaatgactccatat
aacaccccccagctttctcctgcaactactccagccaacaaaaaaaaccgactgcccata
ggacagcagttggcagcgattactgcctgggatacctctgctaccaatctgtcagctcac
ataactctagtaaccccttttgccactcgaagcagaagtagatcaaacatgctaatggac
cagcatggagatcatgaaggatcctcccaggagactattccagaagtgcagccagaagaa
gtgctggtgatttctctggggacaggtccacagattactccaggaatgatgtcagaaaat
gaggtgttaaacatgcagcttgcagatggtgggcagggagatgtccccatcgacgagaac
aagctccatggcaaacctgacaaaaccttgcgcttctccctctgcagtgacaatctggaa
ggaatatctgaaggcccttccaatcgctccaactcggtgtcctccctggacctggagggg
gagtcggtgtcggagctgggcgcgggcccctcgggcagcaacggcgtggaggctctgcag
ctgctggagcacgagcaagccacaactcaggataacctggatgacaagctccgtaagttt
gaaatccgtgacatgatgggtttgactgatgacagagacatttcagaaactgtgagtgag
acctggagcacagatgtcctgggaagtgacttcgaccccaacatcgacgaggaccggctg
caggagatcgcaggtgcagctgcagagaacatgctaggcagcttgctgtgtttgccaggt
tcaggatccgtgttgcttgatccctgcacaggttcaaccatatcagaaaccacaagtgag
gcgtggagtgtggaagtattaccaagtgattcagaggctccagatttaaaacaggaggag
aggctccaggagctggagagctgctctgggctgggcagcacgtctgatgacacagatgtg
agggaggtcagctcccggcccagcacccccggcctgagcgttgtgtcaggtattagtgca
acatctgaagatattcctaacaagattgaggatctcaggtctgaatgtagctctgacttt
gggggcaaagattctgtaacaagtcctgacatggatgaaacagcccatggagccagtcag
ttgacatctcctccttctcagacagattctttgcttgcattgtttgaccctctgtcctca
aatgagggtgtgtcagctgtggtgaggcctaaagtgcactatgcaaggccctctcacccc
cctccagacccccccatcctggagggggccgtgggaggcaacgaggcgcggctgcccagc
ttcgggtgccacgctctggtgccggcggagctggaggccttcaagcagcggcactcgtac
cccgagaggctggtgcgcagcaggagctccgacatcgtgtcctcgggcaggaggcccatg
agcgaccctggctggaaccggcgggctggcaccgaggagcgggagctgcccgtggcctcg
agcagcgccggggccgccgcgctggcggccgcctctcagtcctcgtcttcatctcccagc
aaggactcctccaggggagagattgaggaacggaaagacagtgatgatgagaagtctgac
aggaacaagccctggtggaggaaacgttttgtgtctgccatgcccaaagctcctattcca
tttaggaagaaagaaaaacaagaaaaagacaaagatgacatggtgcctgacagatacgca
acgcttcaagatgatcccagcccaaggctcagtgcacaggcacaagctgctgaggacatt
ctggacaagtacaggaatgcaatcaagagaacgagtcccagtgaaggagccatcgtgaac
tacgacagtgcagaggcgcttggggatggtgagagcatgcacgactccccacgggatgag
gctttgcagaacatgtctgcagacgacctcccagactctgcaagccaagtagcacagcca
caaggttctgctttctcctatagggatgcaaagaagaaattgagattggctctttgttca
gcagattctgttgccctcccaatgctgacacattcaacaaggaatggtctcccagaccac
acagaccctgaagataatgaaattgtgtgcttcttgaaagtccagctggctgaggccatc
aacctgcaggacaagaacctgatggcgcagctgcaggagacgatgcgctgcgtgagccgc
ttcgacaaccgcacgtgccgcaagctgctggcctccatcgccgaggactacaggaaaaga
gctccatatatcgcttacctgacgcgctgccgccaaggcctgcagaccacacaggcacac
ctggagaggctcctgcagagagtcctgagagataaagaggtggccaacagatacttcact
acagtctgtgtgaggctactgctggagagcaaggagaagaaaataagggagttcattcaa
gatttccagaagctcacggcagcagatgataaaacagcccaagtggaggattttctgcag
ttcctgtacggggctatggctcaggatgccatctggcagaatgccagtgaggagcagctc
caggatgcacaattagccatcgagcgcagtgtgatgaatcgcattttcaaacttgccttc
taccctaatcaggatggagatattttgcgtgaccaggtccttcacgagcacatacagagg
ttatccaaagtagtgactgcaaaccacaaggcacttcagatacctgaggtgtacctgcgc
gaggcgccgtggccgtcggcgcagtccgagatccgcaccatcagcgcctacaaaacgccc
cgggacaaggtgcagtgcatcctgaggatgtgctccaccatcatgaacctgctcagcctg
gccaacgaggactccgtgcctggggctgatgattttgttcctgttctggtctttgttctc
ataaaggcaaaccccccttgcctgctgtccaccgtgcagtacatcagcagcttctatgcc
aactgtctgtctggagaggagtcctactggtggatgcagttcacggcagccgtggagttc
atcaaaactatcgatgaccgcaagtag
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