Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454951
Help
Entry
135454951 CDS
T09958
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135454951 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135454951 (EXOSC2)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135454951 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
135454951 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
135454951
NCBI-ProteinID:
XP_064583723
LinkDB
All DBs
Position
17:complement(4827320..4831360)
Genome browser
AA seq
294 aa
AA seq
DB search
MAAVTMRLPAARAPLDSSALRGGEKHLVAPGDTITTDTGYMRGHGTYVEDDKLIASVAGV
VERVNKLVCVRALKARYNGEIGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFSDGAVSLHTRSLKYGKLAQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTANLEPVPLSDREVISRLRN
CIMALVTHKIMLFDTSILYCYEASLPHQIKDILKPEVTEEIVLEARQRLLDSEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaccatgaggctgccggcggcccgcgcgcccctggattccagcgcgctc
cggggcggcgagaagcacctggtggcaccgggggacaccatcaccacggacacgggatac
atgaggggccacggtacttatgtggaggacgacaagctgatcgcctcggtggccggcgtg
gtggagagggtgaacaagctggtgtgtgtcagggcgctgaaggccaggtacaacggcgag
atcggcgacatcgtggtcggcaggattacggaggttcagcagaagcgatggaaagtggaa
acaaattccaggctggattcagtcctgttgctgtcgtctataaatttacctggtggggag
ctgagaaggaaatcagcagaagatgagcttgcaatgagggactacctgcaggaaggggat
ctcatcagtgcagaggtccagtctatattttctgatggagctgtgtcactgcacacccgg
agcctgaagtatgggaagcttgcccagggagtgctggttcaggtctctccctcccttgtg
aaacggcagaagactcatttccatgacctgccctgtggtgcctccgtgatcctcggcaac
aatggcttcatctggatctacccaaccccggagcagaaggatgacgaggctggaggctac
actgccaacctggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaac
tgcatcatggctctggttactcacaagatcatgctctttgacaccagcatcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacattctcaagccagaggtgacagaggag
attgttctggaagctcgacagaggttgctggattcagagggatag
DBGET
integrated database retrieval system
