Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454978
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Entry
135454978 CDS
T09958
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135454978 (SNAPC4)
03021 Transcription machinery [BR:
zle03021
]
135454978 (SNAPC4)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
135454978 (SNAPC4)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
135454978 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
SANT_DAMP1_like
VGCC_beta4Aa_N
Motif
Other DBs
NCBI-GeneID:
135454978
NCBI-ProteinID:
XP_064583787
LinkDB
All DBs
Position
17:complement(2552169..2565646)
Genome browser
AA seq
1547 aa
AA seq
DB search
MSRGPGSAGPLRSPQGLELDAERERIRREIEQLERSLQPGGTGIQLALCDTTLSSDGDDE
DDDDEDCCAEMEVEVEEDSSDDDDDDDVESLPQDPETCLQMNHVYQDVIKEKIEEVELLI
AQNRAQQKEIMDERDGSKTTKAGDGRNLPANVFLGHFMKPYFKDKITGIGPPPNEEAKEK
AAQGIKSFEQLHSSKWKAAEKTLLQKSVVSDRLQRLLQPKLLKLSYWNQKLEKIKTETEK
ETLEKQIKDLEQEIEAINQLPESDLIGNRFDEHDWDKISNIHFDGQRSSEELRKFWQNWE
HPSINKEEWTEEELDRLKQIAAEHNCLDWQSIAQELGTNRTPFQCLQKYQLYNKDLKRKE
WSKEEDQMLLELVQEMRVGSHIPYKKIAYYMEGRDSAQLIYRWTKRVDPSLKKGPWTPEE
DAMLMAAVKKYKEKDWYKIRREVPGRSDAQCRDRYVKALHWDLKKGKWSLEEEEQLIELV
QKHGLGRWSKIASELPHRTGAQCQSKWTVMIGSKRKRSGAARRRHAEESSSPSESSSDDE
ELELELELANNSEEENVTTGKEKFAVPSIDLWIPTGTDKQETSREGNQIQSLLSAARPGT
GSSCSEVPRAGCDGDRAADKSSELNTVLMGIANACSTDVLVRNPAEVMAKASQCGKHVLR
VSLEEVRTILRNNTSFQRKLMLRPARLLAMPPGVGAAAGQDAQEVPRRAWRWNREHWRRL
NLDRKLLMAVTPWMGNVLLPRSLRAGTMGFYHTKAAAIHEKVKSMSLSSTPLFALLIQLL
QIDTKGCMRIIKERNLRHLELLKANARSPQQASQNTETSSGNSSQACSQRNSQQGIPKSA
VRRSALRARASPTGALESWAPAVLGAPPALGQRHRVKTVSELLQEKRWRRIQARAAMQRT
VLLAPQVLVSGPLIIQHPAQQIIPCAPAGSSAAAAAGTHSQVQGSAVPTRTSAAGSAPVP
QNHSSAVPETGESPGCSQGTDLQSSKELHEKEALGSSPEGRVSPAVSPAAAEKAPDQGGC
NGQGTASSSASAVLHNQAFVPHQITVVALGLESGTNKLSLSTPVTSELERNRPQQRPVSL
LPALVTPQSASPVLPSSILPFKWVVTPQGLLPSTVQAVLGVPQGSPAAPGGCQAQTAVTS
NGNVSALGGTPVAAEANPPHPSSAETKGPSSQLAGAPLGKAAGQCTHLLPVTPVSAGCIT
CSISAVTPACSDGSSMAPDSCAAPAASPALWAVLLPQPPASTQGSDCQPLPSLTSLGRSS
GSITPKGSSSRAGSSRRRAVHWPGAAAPHSNVPGSSACSGAQALRNRPIASKPPSTDVPP
QPSTSHAQKNLLDFSLISLEDQGLVKEWLSGKQGVQVPPLQTRLPYLPPFLCSIKTLSRL
LLQKAALEVQAASLLASEASGDGGTGDLFHAIGELVQQKLGDNPAYLLLKARFLAAFTLP
AVLATLSPPRVTTTVSAGNQLEESEEEEWQSENPVLKEESCGNEFTGVQEDWRLGDEPGD
EDADLLNQDMGAEESPAQSALGSCTAGADARAPQSRRSARFKKRRRT
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgggccgggctcggccgggcccctgcgctccccgcagggcctggagctggat
gcggagcgggagaggatccgccgcgagatcgagcagctggagcgcagcctgcagcccggc
gggaccggcatccagctggccctgtgcgacaccaccctcagctcggatggtgatgatgaa
gatgatgatgatgaagattgttgtgctgaaatggaagtggaagtggaagaagacagcagt
gatgatgatgatgatgatgatgttgaaagcctgccccaggatccagaaacctgcctgcag
atgaaccatgtgtaccaggatgttatcaaggaaaagattgaggaggtggagctgctcatt
gctcagaacagagcacagcagaaagaaatcatggatgagcgtgatggttcaaaaacaacc
aaggcaggagatggcagaaatctcccagcaaatgtgtttttgggtcattttatgaagcca
tactttaaggataaaataacaggaattggccctcctcccaatgaagaggccaaggaaaag
gcagctcagggcatcaaatcctttgaacagctgcattcatccaagtggaaagctgcagag
aagactctgctgcagaaatccgtggtgagcgaccgcctgcagcgcctgctccagccaaag
ctgctcaagttgagttattggaatcagaaactggagaaaatcaagactgaaacagaaaaa
gagaccttggaaaagcaaatcaaagacttggagcaagaaatagaggcaattaaccaactc
ccagaaagtgacttgataggaaacagattcgatgagcatgactgggacaagatttcaaac
atccactttgatggacaacgcagctcagaggaactgaggaagttttggcaaaactgggaa
catccaagcatcaacaaagaggaatggactgaggaggagctggacaggctgaagcagatt
gctgctgagcacaactgcctggactggcagagcattgcccaggagctggggacaaacagg
acacctttccagtgcttgcagaaataccaactctataacaaagatttaaaaaggaaagag
tggagcaaggaggaggatcagatgcttttagagcttgttcaggagatgagagtggggagc
catatcccatacaagaaaattgcttattacatggaaggaagagattctgctcagctgatt
taccgctggacaaagagagtggaccccagcttgaagaagggaccctggacaccagaggaa
gatgctatgctgatggctgcagttaagaagtacaaggagaaggactggtacaaaatccgg
agggaagtgccgggcaggagcgatgcccagtgccgggaccggtatgtgaaagcattgcac
tgggatttaaagaaaggcaagtggagcttggaggaagaggagcagctgattgaactggtt
caaaagcatggcctgggtcgctggagtaaaatagcttcagagctgccccatcggactggt
gcccaatgccagagcaagtggacagtcatgattggctctaagaggaaaagatctggggca
gccagacggcgccacgctgaggagagctccagcccctcagagagcagcagtgatgatgag
gagctggagctggagctggagctggcaaacaactcagaggaggagaatgtgaccacagga
aaggagaagtttgcagtgcccagcattgacctgtggataccaacagggacagacaaacag
gagacaagcagagagggaaaccagatccagtccctcctgtctgctgccaggcctggcaca
gggagcagctgcagtgaggttccaagggcagggtgtgatggagacagagctgctgataaa
tcatctgagctgaacactgtgctcatgggcattgcaaatgcctgctccacagatgtgctg
gtgaggaatccagcagaagtgatggccaaggcttcccagtgtgggaagcacgtgctgcgg
gttagcctggaggaggtgaggacaatactgaggaacaacacgagcttccagaggaaactg
atgctgagacctgccaggcttttggccatgccccctggagtgggtgcagctgctggccag
gatgcccaggaggtgcccaggagagcctggcgctggaacagggagcactggaggaggctg
aacctggacaggaagctgctgatggcagtgaccccatggatgggcaatgtgctgctgccc
cgcagcctgagggctggcaccatgggcttctaccacacaaaagctgctgctattcatgag
aaggtgaagtcaatgagtctcagcagcactcccctgtttgcactgctcattcagctcctc
cagattgataccaagggctgtatgaggattattaaggagaggaacctgaggcacctggag
ctgcttaaggctaatgcaaggagccctcagcaggcttcccaaaatacagagacttcttca
ggaaactcatcccaggcttgttctcagaggaattcccaacagggcatccccaagagtgct
gtcaggagatctgccttgagagcacgggccagccccactggagccttggagagctgggcc
ccagctgtgctgggagctcccccagccctgggccaaaggcacagggtgaaaactgtctca
gaactgctgcaagagaagcgttggaggaggatccaggccagggcagccatgcagaggaca
gtgctgcttgccccacaggtgctggtttcagggcctttgatcatccagcacccagcacag
caaatcattccctgtgcaccagcagggagctcagctgcagctgctgctgggacacacagc
caagtacagggttcagcagtgcccacaaggacttcagctgcaggttctgctcctgtgcct
caaaaccattcctctgcagtgccagaaactggggagagccctggctgctcacaagggaca
gatctacagtcaagtaaggaacttcacgaaaaggaagctctgggaagcagccctgaagga
agggtttctccagctgtgagtccagctgcagcagagaaggccccagaccagggagggtgc
aatggtcagggcacagccagcagctcagcttcagcagtgttgcacaaccaggcttttgtg
cctcaccagatcacagtggtggctcttggcctggagtctggcaccaataaattgtccctt
tccacaccagtcaccagtgagctggagaggaacaggccacagcagaggccagtcagcctg
ctgcctgctctggtcactccacaatctgcttctcccgtgcttcccagcagcatcctgccc
ttcaagtgggttgtgaccccccagggtctgctccccagcactgtgcaggctgtgctgggt
gttccccagggatcaccagctgctcctgggggatgccaggctcagacagctgtgacttcc
aatggcaatgtctctgctttgggaggaactcctgtagcagctgaagcaaatccacctcac
cccagcagtgcagagacaaaaggaccaagttcccagctggcaggagctcctttgggaaag
gcagctggccagtgcacccatctcttacctgtgaccccagtgagtgctggatgcatcaca
tgcagcatttctgctgtaacccctgcgtgttcagatggctcctccatggctccagactcc
tgtgcagctccagctgccagcccagccctgtgggctgtgctgctgccccagccccctgcc
agcacccagggctctgactgccagcctctgcccagtctcaccagcttgggaaggagcagt
ggctccatcacaccaaagggatcatcctccagggcaggcagcagcaggagaagggctgtg
cactggccaggagctgcagctcctcacagcaatgttccagggagctctgcctgctctggt
gcccaggccctgaggaacagacccattgcctccaaaccaccaagcactgacgtcccccca
cagccaagcacctcccatgcacagaagaatctccttgacttcagcctgatctccctggag
gaccaggggctggtgaaggagtggctgagtgggaagcaaggggttcaggtgccaccactg
cagaccaggctgccttatctgccccctttcctctgcagcataaaaaccctgtcaaggctc
ctgctgcagaaagcagctctggaggtgcaggcagcctctctgctggcctctgaggccagt
ggggatgggggcactggggatctcttccatgctattggagaactggtgcagcagaaactg
ggtgataaccctgcttacctcctgctgaaagccagattcctggcagccttcaccctccca
gctgtcctggcaactctgtctcctcccagagtgacaacgactgtgtcagccgggaatcag
cttgaggagagtgaggaggaggagtggcagagtgagaacccagtgttgaaggaagagagc
tgtgggaatgaattcacaggagtacaggaggactggagacttggggatgagcctggagat
gaagatgctgatttactaaatcaggacatgggggctgaggagagccctgctcagtctgcc
ttgggctcctgcactgctggggctgatgccagagctccccagagcaggagaagtgctcgc
ttcaagaagaggaggaggacatga
DBGET
integrated database retrieval system
