Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455039
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Entry
135455039 CDS
T09958
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135455039 (TTF1)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
135455039 (TTF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Poxvirus_B22R_N
Myb_DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
135455039
NCBI-ProteinID:
XP_064583905
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All DBs
Position
17:4181749..4191159
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AA seq
690 aa
AA seq
DB search
MKDKAHAGDCQVQDSVKRKKKKRKPIESNNNHENAESVEDGEPGHASLVLFEDAAAQAEE
GREKKKKLKKKNEQQQTLLDKYFGKLEHEISNGTGAAASPRKKRKRKDSSHELSDGSCVS
ENHNCQQEAADCVYFKKHKKKRKEKHPGEDELGELPPCEEHSKGHKEKPKKKRKKRREGQ
EDTEGAAEAPLSPPGQHRGWPCPAGEDGGSDAASASTEVSVELPAGFSTPSKAAGRAPAP
AKQPYKSRAYITEESSSDSDVMTPKALASHEEHQNNSFAELAAYDDVSVDCEEGLDSVTS
LFMDLDTARQELEEFIPHVKNISDSSIRKMAGRDLMRFKEFKKQGMAVRFGRFTQKENKQ
IRKNVEEFLALTGIDSAEKLLFTSRYPDDKDTIHRLKTEHHFCEKISEGIPRPWRLIYYR
ARKIFDPNNYKGRYTKEEKEQLKKYQALHGNDWKKISELMSRSNLSVAMKFSEIKSAINY
GPWTEEETQKLMSAVKDVLRRKLTVENANSLSSLEQPDSELWIEREQLHQALPWTEIEAR
VGSRYWRQCKQKWNSILTSKLTRGQQLFRGTNGLRTKITLIKRLYQTKAEDASEVNWDEL
STAIGDVPRDYVQSKFYRLKVSFVPLWKRRTFSEIIDYLYEKTLPDLEEKLREEEGKQRS
VDSSAARQQQQAFRLSDIFDSSDENDELMN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaagcacatgcaggtgattgtcaagtccaggattctgtcaagaggaagaaa
aagaagaggaaaccaattgagtccaacaacaaccacgaaaatgctgaaagtgtggaagat
ggagagcctggccatgcttccctagtgctctttgaagatgcagcagcacaggctgaggag
ggcagggaaaagaagaaaaaactgaaaaaaaagaatgagcagcagcagactctgctggat
aaatactttgggaagctggaacatgagatcagcaatggcactggagcagctgcttccccg
aggaagaagaggaagaggaaggacagcagccacgagctcagcgatggcagctgtgtctct
gagaatcacaactgccagcaggaggctgctgattgtgtttattttaaaaagcacaagaag
aagaggaaagagaagcatcctggagaggatgagctgggtgagctgcctccctgtgaggag
cacagcaagggccacaaagagaaacccaaaaagaagaggaagaagaggagagagggccag
gaggacacagagggagcagctgaggcgccgctgtcacccccagggcagcacagggggtgg
ccttgccctgcaggggaggatggaggctctgatgctgcctctgccagcactgaggtctcc
gtggagctccctgcaggcttctccacccccagtaaagcagctgggagggctccagcacct
gctaaacagccctacaagagcagggcttatatcacagaggagagctcttcagactctgat
gtgatgacaccaaaagccttggcctcacatgaagagcaccagaacaattcctttgctgag
ctggcagcctatgatgatgtcagtgtggattgtgaggaaggcctggactctgtcacgagt
ttatttatggatttggatactgcaagacaagaactggaagagtttattcctcatgtgaag
aatatatcagacagttcaatcaggaaaatggctggaagagacctgatgaggtttaaggag
tttaaaaagcagggtatggctgtcaggtttggcagatttacccagaaggaaaataaacaa
atcaggaaaaatgttgaagagttcttagcacttactggaatagacagtgctgaaaaactt
ttgtttacctcgaggtatccagatgataaagacaccatccatcgcctgaaaacagaacat
catttttgtgagaaaatctctgagggcattccccggccctggaggctgatttattatcga
gcaaggaagatatttgacccaaataattataaaggaaggtatactaaagaagaaaaagaa
caattaaagaagtatcaagctctgcatggcaatgattggaagaagatttctgagttgatg
tcccgttctaacctctcagttgctatgaaattctctgaaatcaagtcagctattaactat
ggtccatggacagaggaggagacccagaagttaatgagtgcagtgaaggatgtgctgagg
agaaaactgacagtagaaaatgcaaattccctttcctccctggagcagccagactcagag
ctgtggattgagcgggagcagctgcaccaggcactgccatggactgagattgaagccaga
gtgggaagtcgatactggagacaatgcaaacagaaatggaattcaattctaacaagcaaa
ttgaccagagggcagcagttgttcagagggaccaatggattaaggaccaagatcaccctt
attaaaaggttgtatcaaacaaaagcagaggatgccagtgaagtaaactgggatgagctc
agtactgctattggagatgttcctagagactatgttcaatcaaagttttataggctaaaa
gtgtcttttgtccctctctggaaaagaaggactttttctgaaattattgattatctgtat
gaaaagacactcccagaccttgaagaaaagttaagggaggaagaggggaaacagaggagt
gttgacagttcagcagccaggcagcagcagcaggctttcaggctcagtgacatttttgac
tccagtgatgagaatgatgaattaatgaattaa
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