Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455055
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Entry
135455055 CDS
T09958
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04510
Focal adhesion
zle04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135455055 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
135455055 (RAPGEF1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
135455055
NCBI-ProteinID:
XP_064583943
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Position
17:4422888..4507211
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AA seq
1227 aa
AA seq
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MSGKIEKADSERSHLSSFTMKLKGKFHSPKIKRTPSKKGKQVELTVKTPEKSVNKNVSWL
EEKEKEVVSALRYFKTIVDKMAIDNKVLEMLPGSASKVLEAILPLVQTDPRIQQSSAISS
CYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKDVIKAVLDGVKELVRLTIEKQEHP
SPTSPVKPSLPACKSDSPSELPLTDREMEILNKTTNMTQSNELLTDSMDEEVAPPKPPLP
SIRVAENSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRR
LSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDQSDHYDPDY
EFLQQDLSNTDQIPPQGPSVLSPLPESLGESGSPFHGHTFQLPQGSSPPLEPCSLPGAAQ
PTETPPALPEKKRRSAASQTSESSGCRVSYERHPSQYDNISEDDLQSAALVPSMPFTPFA
AVLPFQQGNSSAPVGFIGDFAAPVSNSDPEKPPPLPEKKNKHMMAYMQFVEDYSEPQPSM
FYQTPQNEHIYQKKNKYLREVYGINDSFPSSDPPQDLAPPPALPPKQRQLQASYAASSFS
SVSYCVQQPKVPFSPEDCAATQGLTMSVSNSFLSRHSSFPVHSYKSVFRSYSQDFVPHNQ
VSIPPFLSSTSSSCSTPPFPPVHVSQSPDLAVPAAASQSPSTVDVPNSSSQESSFNGSAP
VCLPSETSFTDSLQTPSSENASEEAGEGEYVNLYSSGQSNGELPGSEGESPPVKDGPSKD
SALNSSAMGKEGKDGAERQPQSPDALESSQLEEEVDELSLIDHSEIMSRLTLKQEGDDGP
DVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFCHFPDTF
KKRVSKNTFFVLVRVVDELCLVELTEEILKLLMDLVFRLVCSGELSLARVLRKNILDKVD
QKKMLSYANSIKPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKE
QNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYL
AILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALADVEPPCIPYLGLILQ
DLTFVHLGNPDYIDSKVNFSKRWQQFNILDSMRCFQQVHYDIKRNDDIVSFFNDFSDHLA
EEALWELSLKIKPRNITRRKTDREEKT
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaagatcgagaaagcagattctgagcgttcccatctctcctcgttcaccatg
aagttgaagggcaagtttcattcaccaaaaataaagagaacaccctcaaagaaaggaaag
caagttgaactgacagtgaaaacaccagagaagtcagtgaacaaaaatgtatcatggctg
gaggaaaaggagaaggaggtggtcagtgcactgcgctactttaagactattgtggataaa
atggcaattgataacaaagtgctggagatgctgccaggctcagccagtaaagtgctggaa
gccatcctgcccttggtgcagactgacccacgaatccagcaaagttctgccatctcatcc
tgctacagccgagtgtaccagagcctggccaacctcatccgctggtctgatcaggtgatg
ctggagggagtgaactcagaggacaaggagatggtcacaacagtgaaggatgtcataaaa
gctgttctggatggagtcaaggagctggtcagactcacgattgaaaagcaggagcatccc
tctcccacaagcccagttaaacccagtttgccagcatgtaaatctgacagcccatcagaa
cttccccttacagaccgagaaatggagatcctcaacaaaacaacaaacatgactcaatcc
aacgagctgctgactgactccatggatgaagaagttgcacctcctaaaccccctctgccc
agcattcgtgtggcagagaacagccctccaccagcactgccccctaaaaaacgtcagtct
gcgccttccccaaccagagtggctgtggtggcccccatgagcagagctaccagtgggtcc
agtttacctgttgggatcaacagacaggattttgatgttgactgctatgcccagaggagg
ctgtcaggtggaagccactcctacgggggggagtctcctcggctgtccccgtgcagcagc
attggcaagctgagcaagtcagacgagcagctctcgtcgctggaccgcgacagcgggcag
tgctcccgcaacaccagctgtgaaaccctggatcaatcagatcactatgatccagactat
gaattcctgcagcaggacctctccaacactgatcagatacctcctcaggggcccagtgtc
ctcagccccttgccagagtccctgggcgagtctggctcccctttccacggacacacgttc
cagctcccgcagggctcctctcctccgctggaaccctgcagcctcccaggagcagcacag
ccaacagagactcccccagctttgccagagaagaagaggaggagtgcagcctcgcagacc
tcggagagctccggctgcagggtgtcctacgagaggcacccatcccagtacgacaacatc
tccgaggatgacctgcagagcgccgccctcgtcccctccatgcccttcacgccctttgct
gctgttctgcctttccagcaaggaaactcttcagctccagtgggattcattggtgatttt
gctgctccagtttcgaacagtgacccagaaaagccgccacctctgccagagaagaaaaac
aaacacatgatggcctacatgcagtttgtggaggactactccgagccacagccctccatg
ttctaccagacccctcagaacgagcacatctaccagaagaagaacaagtacctcagggaa
gtctatgggatcaacgactccttccccagctccgacccccctcaagatctggcacctcct
cctgctctgccacccaagcagaggcagctgcaggcctcctatgctgcctcttctttctcc
tctgtctcctactgtgtccagcaacctaaagtgcccttcagccccgaggactgcgctgcc
actcagggcctcactatgtcagtctctaactcctttctcagcaggcacagctcctttcct
gtgcactcgtacaaatccgtgtttaggtcctactcccaggactttgtgcctcacaaccaa
gtctccatacctcctttcctctcttctacctcctcctcctgctccactccgcctttcccg
cccgtccatgtgtcccagagccccgacctagcggtgcccgctgcagccagccagtcaccc
agcactgtggatgtgccaaactcctcttctcaggagagcagctttaatgggagtgctcct
gtctgccttccttctgaaacctctttcactgattctctccagacgccttcgagtgaaaac
gccagtgaggaggctggtgagggtgaatatgtcaatctgtattcctctggccagagcaac
ggggaactcccaggctctgaaggagaatctccccctgtcaaagatggcccctccaaagac
tcggctttgaacagcagtgccatgggcaaggagggcaaagatggtgctgaaaggcagcca
cagtcaccagatgctttggagtcatcacagctggaggaagaggtagatgagctgtccctt
attgaccacagtgaaatcatgtccagattaacactgaagcaagagggggatgatgggcca
gatgtccgaggtggatctggggacattctcttggtgcacgccacagagaccgacaggaaa
gatctggtgctgtactgtgaagcctttctgaccacatacaggacattcattacccctgaa
gagctcatcaagaagctgcagtacagatatgagaagttttgccacttcccggacacgttc
aagaagagagtcagtaagaacaccttctttgtgctggtgagagtggtggatgagctgtgc
ttggtggagttgacagaggagatcctcaagctgctgatggacctggtgttcaggctggtg
tgcagtggggagctgagcctggccagggtgctgcgcaagaacatcctggataaggtggat
cagaagaaaatgctgagctacgccaactccatcaaacctctcgcagccagaggggtggca
gccaggccagggacactgcatgatttccacagccatgaaatagctgagcagctgaccctg
ctggatgctgaactcttctataaaatcgagattccagaagttctgctttgggcaaaggaa
caaaatgaagagaagagtcccaacctgacacagttcacagagcactttaataacatgtcc
tactgggttcgttcaataattatgctacaagagaaagcccaggaccgagagaggctgctc
cttaaatttataaagattatgaagcacttacgaaagctgaataattttaattcctatctg
gccattctttctgcactggattctgcacccatccgaaggctggagtggcagaagcaaacc
tcagagggcctggctgagtactgcaccctgatcgacagctcctcgtccttccgcgcctac
cgagcggccctggccgacgtggagcccccctgcatcccctacctaggcctgattctgcag
gacctgacctttgtccatctgggaaaccctgattacattgacagcaaagtgaacttttcc
aagcgctggcagcagtttaacatcctggacagcatgaggtgcttccagcaagtacattac
gacatcaaaaggaacgacgacatagtgtcattcttcaacgacttcagcgaccacctggct
gaggaggccctgtgggaactgtcgctgaaaatcaaaccgcggaacatcacgaggcggaaa
acagatcgggaagagaaaacctag
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