Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455168
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Entry
135455168 CDS
T09958
Symbol
RABGAP1
Name
(RefSeq) rab GTPase-activating protein 1
KO
K20284
Rab GTPase-activating protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135455168 (RABGAP1)
Membrane trafficking [BR:
zle04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
135455168 (RABGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
135455168
NCBI-ProteinID:
XP_064584190
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All DBs
Position
17:complement(1489088..1551213)
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AA seq
1068 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QRELEDVLMDPPMEDQGSDRDLGEVRTDGDGEEPVVLEASASSTINPVSVAGLQKPEMSL
PVKPSQGDCEDLSPFTPVTDEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRGQCQIS
LDVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNAE
LFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATATPQTPDSDIFTFSVSLEIKED
DGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSRGKDVRSGD
MHLLDLESMGKSSDGKSYVITGSWNQKSPHFQFVNEETPKDKVLFMTTAVDLVITEVQEP
VRFILETKVRVCSPNERLFWPFSKRSSTENFFLKLKQIKQKDRKNNSDTLYEVVCLESES
ERERRKTTASPSLRLPQSGSQGSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILETW
GELLSKWHLNLSVRPKTLSALVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKESP
QDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLH
MPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEAH
MYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTTKDDLLLTDFEGALK
FFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFERE
NRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEEE
KRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKAEIEK
IRQKVDDCEHCREFFNKEGRVKVASTAKDGSDEDTDEEKETLKNQLREMELELAQTKLQL
VEAECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTVTGVQGKETC
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcttctgttggaaaaatcagtgtctcttcagactcggtatccactctt
aacagtgaagattttgtcttggtttccaggcaaggggatgaaacaccatctacaaataat
ggtagtgatgatgaaaaaacaggactgaagattgtggggaatggaagtgagcagcagctg
cagcgggagctggaggacgtgctgatggatccacccatggaggatcagggcagtgaccgg
gacctgggagaagtcagaactgatggagatggggaagaacctgttgtccttgaagcgtca
gcatcctccaccattaacccagtgtcggtggcaggactccagaaaccagaaatgagcttg
ccagtgaaaccatcccaaggagactgtgaggatttgagccccttcacgccggtgacggac
gaggacagcgtggtgttcagcaagctgacctacctgggctgtgcctcggtgaacgcgccg
cgcagcgaggtggaggcgctgcgcatgatgtccatcctgcggggccagtgccagatctcc
ctggacgtcaccctgtccgtgcccaacgtctccgagggcaccgtcagacttttagatcct
cagacaaacacagaaatagcaaattatccaatctataaaatccttttctgtgtacgaggg
cacgatgggacccctgaaagtgattgctttgctttcactgaaagccactacaatgcagaa
ctcttcaggattcatgtcttccgatgtgaaatccaagaggctgtgagccgaatcctgtac
agctttgccactgccttccggcgctctgccaaacagaccccgctctcagccactgccacc
ccccagactcctgacagcgacatcttcaccttctccgtgtctctggaaatcaaagaagat
gatgggaaaggttatttcagtgcagttcccaaagacaaggacaggcaatgcttcaaactc
cgccaagggattgataagaagattgtgatttatgtgcagcagacaacgaataaagaactt
gctattgaaagatgttttggccttctccttagccgtgggaaagacgttcggagtggcgac
atgcaccttctggatttggagtccatgggtaaaagttctgatgggaaatcatacgtgatc
actgggagctggaatcaaaagtctccacacttccagtttgtaaatgaagaaacaccaaaa
gataaagtgttgttcatgaccactgctgtggatttggtcataactgaggtgcaggagccc
gttcgattcattctggagacaaaagtcagagtttgctcacctaatgagaggctgttctgg
cccttcagcaaacggagctcaactgaaaatttcttcttaaaattgaaacagatcaagcag
aaggacaggaagaacaactctgacactctgtatgaggttgtgtgcctggagagtgaatct
gagagggagaggaggaaaaccacagccagcccctccctgcgcctgccccagtcgggctcg
cagggctccatgatcccgtcgcctccagaggatgatgaggaggaagacaatgatgaacca
ctcttaagtggttctggagatgtttccaaagagtgtgcagaaaaaattcttgaaacgtgg
ggagagctgctgtccaagtggcacctgaacctgagcgtgcggcccaagacgctgtcggcg
ctggtgcggagcggcgtccccgaggcgctgcggggcgaggtgtggcagctgctggctggg
tgtcacaacaacgaccacctggtggagaagtacaggatcctcatcacaaaggagtctcca
caagacagtgccatcacccgggacatcaatcgaacgttccctgcccatgattatttcaaa
gacactgggggagatggccaggactccctgtacaaaatatgcaaggcctactcagtgtat
gatgaggagattggctactgccaaggccagtccttcctggctgctgtgctgctgttacat
atgcctgaggagcaagctttcagtgttctggtcaaaatcatgtttgattatggactcagg
gaacttttcaaacagaactttgaagatttgcactgcaagttctatcagctggagcgcctc
atgcaggaatacattcctgatctgtataaccacttcctggacatcagccttgaagcacac
atgtatgcttcccagtggttcctgaccctgttcactgcaaaattccctctctacatggtc
ttccacattattgacttactcctatgtgagggaataagtgttatcttcaacgttgcactg
ggattgttaaaaactaccaaggatgatttgctgctgactgactttgagggggctctgaag
ttcttccgagtgcagctgcccaagcggtaccgctccgaggagaacgccaagaagctgatg
gagctggcctgcaacatgaagattagccagaagaagctgaagaaatatgaaaaggaatat
cataccatgagagagcagcaggctcaacaggaggatcctatagaaagatttgagcgcgag
aaccggcgcctgcaggaggccaacatgagactggagcaggagaacgacgacctggcccac
gagctggtcaccagcaagattgcactgaggaaggacttggacaatgcagaggagaaggca
gatgccctcaataaggagctgctaatgaccaaacagaagctgattgatgcagaagaagaa
aagaggcgcctggaggaagaatctgctcagctgaaggaaatgtgtcgtagggaactagat
aaggcagagtcagagatcaaaaagaacagctctattattggtgactacaaacagatttgt
tcccagctgagtgagcgactggaaaagcagcaaacagcaaataaagctgaaattgagaaa
atacggcaaaaggtggatgactgcgagcactgccgcgagttcttcaataaggaaggccgt
gtgaaggtggccagcactgccaaggatggttcagacgaggacacggacgaggagaaggaa
actctgaagaaccagctgagggaaatggagcttgagctggcccagaccaagctgcagctt
gtggaggcggaatgtaaaatacaggatttggagcaccatttgggtctggctctgaatgaa
gtacaagctgcaaagaaaacgtggttcaacagaacaataagctctataaaaacagtgact
ggagtccaaggaaaagagacttgttga
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