Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455174
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Entry
135455174 CDS
T09958
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04010
MAPK signaling pathway
zle04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135455174 (CACNA1B)
04020 Calcium signaling pathway
135455174 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135455174 (CACNA1B)
Ion channels [BR:
zle04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135455174 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
135455174
NCBI-ProteinID:
XP_064584210
LinkDB
All DBs
Position
17:complement(9079265..9401705)
Genome browser
AA seq
2378 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIPQGTAP
AETGSGSSYNMLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNESSSYF
RRKEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGL
FLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLR
IFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTT
NFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVF
LAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGT
VSRSSSVSSVNSPKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTL
HIRPDMKTHLDRPLVVEPRSEGRNNLTKLSPVDVQEVVEHPKPTSADGAEAPRKHHRHRE
KEKLGEQEKGDVTKEESGEAGAGTKEERHRQHRSRSKEVEGGSKEGKSDRSRGQEGGKRH
HRRGSVDEGGEKEHRRHRSHRHSSDRPSKEGNGTANGARGERRSRHRGGSRSGNRDGEPG
TKGDSGEEPHRRHRLRNRALSTYESVEKDSGEKEGEAGEKEHRNHQPKENQCELEASGSG
SGPGSVPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETT
VIPMNNVEFESKTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEM
VILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSY
FRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDC
VVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEV
EAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSI
FYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMP
QNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMF
SMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADNFINLSFLRLFRAARLI
KLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHN
NFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKKECGSDFAYFYFVSFIFL
CSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLR
HMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQ
HQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQV
QPPGGLCQPGPVSLFHPLKATLEQTQPTAFSNAKAFLRQKSSASLNNGGALPPPEGGIKE
SSSWGTQRTQDVFYETRSPAFERGHSEEIPIERVVEMKEISPTVANGEPQPGLESQGRAA
SMPRLAAETQRSKARSPGSYLAPIPDTSPMKRSVSTLAPQRPHAMHLYEYSLERMPPEQG
HHHHHHRCHRRKEKKQKSLDRAAHHMADGQAVAQSGESSSKDKKQERGRSQERKQHSSSS
SEKQRFYSCDRYGSRDRAQPKSADQSRPTSPNGGPEHGPHRQGSGSVNGSPLLSTSGAST
PCRGRRQLPQTPLTPRPSITYKTANSSPVHFTTFQTPTFSPGRLSRGLSEHNALLRGEQQ
PPPPAVARIGSDPYLGHRDDATADSPQRAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQ
SHQIRRVPNGYHYTLGLNTGPGARGRSYYHEADEDDWC
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggatggagacaagacaccgatgtcagag
agactggatgacactgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgtttttcacaaaggctcttacctgcgcaacggctggaacgtg
atggattttgtcgtggtcctcactgggattctggccacggctgggacggattttgacctg
cggaccctgcgagccgtgcgggtgctgcggccgctgaagctcgtgtcaggaatcccaagc
ctgcaggttgtcctcaagtccatcatgaaggccatggtgcccttgctgcagattgggctg
ctcctcttcttcgccatcgtgatgttcgccatcattgggctggagttttacatgggcaag
ttccacaaaacctgcttttccaacgagacaggtgaggaggtgggggattttccctgtgga
gaggagcctcctgccaggcagtgtgagagcgggaccacgtgcagggagtactggcagggc
cccaactatggcatcaccaactttgacaacatcctcttcgccgtgctcaccgtcttccag
tgcatcaccatggagggctggaccgacatcctctacaacacaaatgacgctgcaggaaac
acctggaattggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcctatcaggtgaatttgccaaggagcgagagcgggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcagatcgagcgcgagctcaacggatacctg
gagtggatcttcaaagcagaggaggtgatgctggccgaggaggacaagaacgccgaagag
aagtcccctttggacgggagggccgcctcggaagggccgattcctcaaggcacggcgccg
gcagagactggcagcggcagcagctacaacatgttgaaaagagccgcaataaagaagagc
aaaaatgacctgattcatgcagaagaaggtgaggaccatttcacagacatttgctccgtt
gggtctccctttgcccgtgccagtttgaagagtgggaagaacgagagctcatcctacttc
aggaggaaggagaagatgttccgcttcttcatccgccgcatggtgaaggctcagagcttc
tactgggtggtgctctgcgtggtggccctcaacaccctctgtgtggccatggtgcactat
gaccagcccgagaagctgaccactgctctctatttcgcagagtttgttttcctggggctg
ttcctcactgagatgtctctgaagatgtatgggctggggccaaggaattacttccactct
tcattcaactgctttgactttggggtgatcgtgggcagtatctttgaggtgatttgggct
gcagtgaagccgggcacctcctttggcatcagcgtcctgcgcgccctgcggctgctgagg
atcttcaaagtgaccaagtactggaattccctgaggaatctggtggtctccttgctgaac
tccatgaagtccatcatcagtttgcttttcctgctgttcttgttcattgtggtctttgct
ttgctggggatgcagctcttcggagggcagttcaatttccaagatgaaactccaaccacg
aatttcgataccttccctgctgccatcctcacagtcttccagatcctgacgggcgaggac
tggaacgctgtgatgtaccacgggatagagtcgcagggcggcgtccattccggaatgttc
tcctccatctacttcatcgtgctcacgctgtttggtaactatactctcctgaacgtgttc
ttggccatcgctgtggacaacctggccaacgcccaggagctgaccaaggacgaggaggag
atggaggaagccaccaaccagaagctggccctgcagaaggccaaggaggtggctgaagtg
agccccatgtcagcagccaacatctccatagctgcttttgtaaagcaaactcgaggtact
gtatctcgcagctcgtcagtctccagcgtaaattcacccaagcagcagaattcctccaaa
tccaagtcggtttgggagcagaggacgagccagatccggatgcacaacttccgagccagc
tgcgaggcgctgtacaacgagctggaccccgaggagcgcgtccgctacgccaccaccctg
cacatccgtcccgacatgaaaacccacctggaccggccgctggtcgtggagccccgcagc
gagggcaggaacaacctcaccaagctgagccccgtggatgtccaggaggtggtggagcac
cccaaacccacctctgccgatggggcagaagcgccaaggaagcaccaccggcatcgggag
aaggagaagctgggagagcaggagaagggagatgtcaccaaggaggagagcggcgaagcc
ggggctggcaccaaggaggagcggcaccggcagcaccggagccgcagcaaggaggtggaa
gggggcagcaaggaagggaagagcgaccgtagcagggggcaggaagggggcaagaggcac
caccggcggggctcggtggacgaagggggtgagaaggagcaccgcaggcaccgcagccac
cggcactcctccgaccggcccagcaaggagggcaacggcaccgccaacggcgcccgcggc
gagcggcgctcccggcaccgcggagggtcccgctccgggaacagggatggagagcccggc
accaagggcgacagcggagaggagccccaccggcggcaccggctcaggaacagggccctg
tccacctacgagtccgtggagaaggacagcggggagaaggagggggaggctggcgagaag
gagcaccgcaatcaccagcccaaggagaaccagtgtgagctggaggccagtggcagtggc
agtggccctggcagtgtccctgtgcacaccctgcccagcacttacctgcagaaggtgcct
gagcagccggaggatgccgacaaccagaagaacgtgaccaggatgattcagccccccctg
gacaaaaccaccactgtgaacatccctgtcaccatcactgcccctccaggggaaaccact
gtcatcccaatgaacaacgtggagtttgaaagcaaaacggaggagaagaaagacgtcgat
gacctgaccaaaaatgggcctaaaccaatcctgccttacagctccatgttcatcctcagc
cccacaaacccgatccgccgcctgttccactacatcgtcaacctgcgctacttcgagatg
gtgatcctgatcgtcatcgccctcagcagcatcgccctggctgcagaggaccctgtgcag
gctgagtctcccaggaacgacgctctgaaatacctggattatatatttacaggagtcttc
acctttgagatggtgatcaagatgattgacctggggctgctgctccaccctggctcctac
ttccgtgacctgtggaacattctggacttcattgtggtcagtggggccctggtggctttt
gccttctcaggaaccaaaggcaaggacatcaacaccatcaagtccctgcgagtcctgcgt
gtgctcaggcctctgaaaaccataaaacggctgccaaaactaaaggctgtctttgactgc
gtggtgaactccctgaagaacgtcctcaacatcctcattgtttacatgctcttcatgttc
atcttcgctgtcatcgccgtgcagctcttcaagggccgcttcttctactgcacggacgag
tccaaggagctggagaaggactgcaggggccagtacctcgattatgaaaaaaatgaggtg
gaagcacagcccagggaatggaaaaaatacgagttccactacgacaatgtgctctgggct
ctgctcacgctcttcaccgtgtccacaggggaagggtggccaactgtgctgaagcactcg
gtggatgccacctacgaggaacaggggcccagccctggctacaggatggaaatgtccatc
ttttacgtggtgtattttgttgtcttcccttttttctttgtcaacatctttgtggcgtta
atcatcatcaccttccaggagcaaggagataaagtgatgtcagagtgcagcctcgagaaa
aacgagagggcctgcatagactttgccataagtgccaagcccctgacccgctacatgcct
cagaacaagcaatccttccagtacaagatgtggaaattcgtggtgtcccctccctttgag
tactttatcatggtcatgattgctctcaacaccatcgtcctcatgatgaagttctatgat
gctccagaagcatacgaagaaatgctgaaatgcctgaatattgtgtttacatccatgttt
tccatggaatgtgtgctgaagatcattgcctttggtgtgctgaattatttccgagatgcc
tggaatgtctttgattttgtaacagtgttgggaagtattactgatattttagtaacagag
attgcggacaacttcatcaacctcagcttcctgcggctcttccgggcagccaggctcatc
aagctcctccgccagggctacaccatccgcatcctgctctggacattcgtgcagtccttc
aaggccttgccttatgtgtgtctcctcattgcaatgctcttcttcatctatgccattatt
ggcatgcaggtatttgggaacattgccttagatgatgaaacctccattaatcggcacaac
aacttccgcaccttcctccaagccctgatgctcctgttcaggagcgccacgggggaagcc
tggcatgagatcatgttgtcctgcttgagcaacagagcctgtgaccccctctctggcctc
accaaaaaggaatgtggcagtgattttgcctatttctactttgtgtccttcattttcctc
tgttccttcctgatgctgaacctgttcgtggcagtgatcatggacaatttcgagtacctg
acccgggactcctccatcctcggcccgcaccacctggacgagttcgtgcgggtgtgggcg
gagtacgacccggcagcctgcgggcgcatcagttacacagacatgtatgagatgctgaga
cacatgtccccacctctaggccttgggaagaaatgcccagctcgtgttgcctataagcgc
ctggtgaggatgaacatgcccatctcccctgaggatttaactgtgcacttcacctccacg
ctgatggccctgatccgcacggccctggagatcaaactggcctcaggaggtgtgaagcag
caccagtgtgatgctgagctgaggaaggagatctcgctggtctggcccaacctgtcccag
aagactctggatttgctggtgcctcctcacaaacctgatgaaatgactgtggggaaggtc
tacgcagccctgatgatatttgacttctacaagcagaataagaacagcagggagcaagtc
cagccccccgggggcctgtgccagcccgggccagtgtccctgttccaccccttgaaggcc
accctggagcagacgcagcccacggccttcagcaacgccaaggccttcctgcgccagaag
agctcggcctccctcaacaacgggggagccctgccacctccagagggagggatcaaagag
tccagttcctgggggacccagcgcacccaggacgtgttctatgaaaccaggagcccagct
tttgagcgaggccactctgaggagatccccattgagagggtggtagaaatgaaggagatc
agccccacagttgccaacggagagccccagccaggcctggagagccagggccgtgcagcc
tccatgccacgcctggctgctgaaacccagaggagcaaagcacggtcacctgggagttac
ctggcacccatcccggacacgagccccatgaagcgctcggtctccacgctggccccgcag
cgccctcacgccatgcacctctacgagtactccctggagcgcatgccaccagagcagggc
caccaccaccaccaccaccgctgccaccggcgcaaggagaagaagcagaagtccttggat
agggccgcccatcacatggctgatggacaagctgtagcccagtctggagagtcttcttcc
aaggacaagaagcaggagcgtggccgctcccaggagaggaagcagcactcctcctcctcc
tctgaaaagcagcgcttctactcctgtgaccgctacggcagccgggaccgtgcccagccc
aaatctgctgaccagagcaggcccacctcgcccaacgggggcccagagcacggcccacac
agacagggcagtggttcagttaatgggagccccttgctgtcgacatctggtgctagtacc
ccctgccggggtcggaggcagctcccacagactccactgaccccacgccccagcatcact
tacaagaccgctaactcctcgcccgtgcacttcaccactttccaaacccccacgttctcc
ccgggccgcctgagccgcgggctgtccgagcacaacgcgctgctgcggggggagcagcag
ccgcccccgcccgccgtggcccgcatcggctccgacccctacctgggccaccgcgacgat
gccaccgccgacagcccgcagcgcgccgcgcccgaggacacgctcaccttcgaggaggcc
gtggccaccaactcgggccgctcctcaaggacttcctacgtctcctcgctgacctcgcag
tcgcaccaaatccgccgcgtgcccaacgggtaccactacacgctggggctcaacacgggc
cccggcgccagaggacgcagttactaccacgaagccgatgaggatgactggtgctag
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